RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 POLE3Q9NRF9 147 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 WDR45Q9Y484 360 aa14.95□□□□□ -0.02
DDB1-215ENST00000539712 A0A1W2PNR3 127 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 CLDN24A6NM45 220 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 TRPC5OSA6NMA1 111 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 KLF4O43474 513 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 GSNP06396 782 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 UBTFL6P0CB48 400 aaPredicted RBP14.94□□□□□ -0.02
DDB1-215ENST00000539712 CCR4P51679 360 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 MVDP53602 400 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ADAM8P78325 824 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 SELENBP1Q13228 472 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 MAPK11Q15759 364 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 DEFB113Q30KQ7 82 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 COX20Q5RI15 118 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ATG16L1Q676U5 607 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 EIF3MQ7L2H7 374 aaKnown RBP14.94□□□□□ -0.02
DDB1-215ENST00000539712 LSRQ86X29 649 aaPredicted RBP14.94□□□□□ -0.02
DDB1-215ENST00000539712 CXorf67Q86X51 503 aaPredicted RBP14.94□□□□□ -0.02
DDB1-215ENST00000539712 KRTAP1-3Q8IUG1 177 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ZNF619Q8N2I2 560 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 TMCO5AQ8N6Q1 288 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ANKFN1Q8N957 763 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 OIT3Q8WWZ8 545 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ST8SIA1Q92185 356 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ARL8AQ96BM9 186 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 OR52B2Q96RD2 323 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 OR52E6Q96RD3 313 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ACER3Q9NUN7 267 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 ZNF226Q9NYT6 803 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 EDARQ9UNE0 448 aa14.94□□□□□ -0.02
DDB1-215ENST00000539712 GJE1A6NN92 205 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 SLCO1B7G3V0H7 640 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 KLF11O14901 512 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 GCM2O75603 506 aaPredicted RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 CYP7B1O75881 506 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 CHRM4P08173 479 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 CHI3L1P36222 383 aaPredicted RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 KHKP50053 298 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 RAC3P60763 192 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 KEAP1Q14145 624 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 RNPS1Q15287 305 aaKnown RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 SYPL1Q16563 259 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 PDCD4Q53EL6 469 aaKnown RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 ATAD3BQ5T9A4 648 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 GTF2IRD2BQ6EKJ0 949 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 PLEKHM3Q6ZWE6 761 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 FCRLAQ7L513 359 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 GTF2IRD2Q86UP8 949 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 TUSC5Q8IXB3 177 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 GABRG1Q8N1C3 465 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 ZNF75CPQ92670 426 aaPredicted RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 ZC3HAV1LQ96H79 300 aaKnown RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 PANX1Q96RD7 426 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 SLC38A1Q9H2H9 487 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 C12orf49Q9H741 205 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 GP6Q9HCN6 339 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 TIGARQ9NQ88 270 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 DLL4Q9NR61 685 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 SDR39U1Q9NRG7 319 aaPredicted RBP14.93□□□□□ -0.02
DDB1-215ENST00000539712 NKIRAS1Q9NYS0 192 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 KLHL13Q9P2N7 655 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 ZANQ9Y493 2812 aa14.93□□□□□ -0.02
DDB1-215ENST00000539712 IGHV3-15A0A0B4J1V0 119 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 ERLIN1O75477 346 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 PRKD3O94806 890 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 PABPC4LP0CB38 370 aaKnown RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 CD99P14209 185 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 PSMB1P20618 241 aaKnown RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 HOXC12P31275 282 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 KCNJ10P78508 379 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 FOXD4Q12950 439 aaPredicted RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 TFAP2EQ6VUC0 442 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 ZNF621Q6ZSS3 439 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 GLB1L3Q8NCI6 653 aaPredicted RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 CNOT9Q92600 299 aaKnown RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 PIK3IP1Q96FE7 263 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 TRNT1Q96Q11 434 aaKnown RBP14.92□□□□□ -0.02
DDB1-215ENST00000539712 CCDC106Q9BWC9 280 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 BCO1Q9HAY6 547 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 SLC35A3Q9Y2D2 325 aa14.92□□□□□ -0.02
DDB1-215ENST00000539712 ARID1AO14497 2285 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 AGAP5A6NIR3 686 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 ZNF814B7Z6K7 855 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 SMAD9O15198 467 aaKnown RBP14.91□□□□□ -0.02
DDB1-215ENST00000539712 SLC22A3O75751 556 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 YES1P07947 543 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 IDO1P14902 403 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 PGCP20142 388 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 RPS4Y1P22090 263 aaKnown RBP14.91□□□□□ -0.02
DDB1-215ENST00000539712 EDNRAP25101 427 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 MERTKQ12866 999 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 GPAT3Q53EU6 434 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 NXNQ6DKJ4 435 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 BEND4Q6ZU67 534 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 PIWIL2Q8TC59 973 aaKnown RBP14.91□□□□□ -0.02
DDB1-215ENST00000539712 PNPT1Q8TCS8 783 aaKnown RBP14.91□□□□□ -0.02
DDB1-215ENST00000539712 PSD2Q9BQI7 771 aa14.91□□□□□ -0.02
DDB1-215ENST00000539712 EXOSC3Q9NQT5 275 aaKnown RBP14.91□□□□□ -0.02
DDB1-215ENST00000539712 LIPT1Q9Y234 373 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms