RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 HGFACQ04756 655 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 SLC29A2Q14542 456 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 ZNHIT3Q15649 155 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 ZKSCAN8Q15776 578 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 TTC19Q6DKK2 380 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 CCDC137Q6PK04 289 aaKnown RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 CBLN3Q6UW01 205 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 DOK3Q7L591 496 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 SPATA21Q7Z572 469 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 SAMD14Q8IZD0 417 aaPredicted RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 CDK20Q8IZL9 346 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 C17orf78Q8N4C9 275 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 RNF214Q8ND24 703 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 OR4M2Q8NGB6 313 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 WFDC12Q8WWY7 111 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 NOL11Q9H8H0 719 aaKnown RBP7.14□□□□□ -1.27
CLIP1-206ENST00000535290 DYNLRB1Q9NP97 96 aa7.14□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF716A6NP11 495 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 CXorf49A8MYA2 514 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 KIF2AO00139 706 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 DNALI1O14645 258 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 CRYAAP02489 173 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 HPXP02790 462 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 JUNP05412 331 aaKnown RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 GFAPP14136 432 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 PRKCAP17252 672 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 NPR2P20594 1047 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 CALCRP30988 508 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 THBS4P35443 961 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 NCBP2P52298 156 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 NAAAQ02083 359 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF117Q03924 483 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 IFT88Q13099 833 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 BAMBIQ13145 260 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 FASTKD3Q14CZ7 662 aaKnown RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 HIKESHIQ53FT3 197 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 VAX1Q5SQQ9 334 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 ABLIM2Q6H8Q1 611 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 ACSM5Q6NUN0 579 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 IKBIPQ70UQ0 350 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 CMC1Q7Z7K0 106 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 TMEM139Q8IV31 216 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 BCL6BQ8N143 479 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 PDIK1LQ8N165 341 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 OR2L13Q8N349 312 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 C1orf162Q8NEQ5 155 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 GPR151Q8TDV0 419 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 UBE2FQ969M7 185 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 ATP6V1E2Q96A05 226 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 TMIGD2Q96BF3 282 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF48Q96MX3 618 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 SLC38A2Q96QD8 506 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 OR5B2Q96R09 309 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 BBS4Q96RK4 519 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 GPR22Q99680 433 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 RBM4BQ9BQ04 359 aaKnown RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 KCNS3Q9BQ31 491 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 KATNB1Q9BVA0 655 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 C7orf69Q9H7B7 122 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 SEC61A2Q9H9S3 476 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 NMRAL1Q9HBL8 299 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 HHATLQ9HCP6 504 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 SLC7A10Q9NS82 523 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 GIMAP4Q9NUV9 329 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 DDX18Q9NVP1 670 aaKnown RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 EMC3Q9P0I2 261 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 MMP24Q9Y5R2 645 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 GPC6Q9Y625 555 aaPredicted RBP7.13□□□□□ -1.27
CLIP1-206ENST00000535290 NOTCH3Q9UM47 2321 aa7.13□□□□□ -1.27
CLIP1-206ENST00000535290 LOC100653049A0A140TA62 436 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MYO1GB0I1T2 1018 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 J3QLI3 93 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 SCAMP2O15127 329 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 PPIHO43447 177 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MRPL33O75394 65 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 KRT34O76011 436 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 NUDT14O95848 222 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 WNT11O96014 354 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 KNG1P01042 644 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 PDYNP01213 254 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ANPEPP15144 967 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 CDH2P19022 906 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 TCN1P20061 433 aaPredicted RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 PCGF2P35227 344 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 MAP3K8P41279 467 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 DIO1P49895 249 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ALDH18A1P54886 795 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 TMEM33P57088 247 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 KRTAP10-3P60369 221 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 RAE1P78406 368 aaKnown RBP7.12□□□□□ -1.27
CLIP1-206ENST00000535290 TRAF3Q13114 568 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 SELENBP1Q13228 472 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 PDK3Q15120 406 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 SLC9A3R2Q15599 337 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF311Q5JNZ3 666 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 TSPO2Q5TGU0 170 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 DCAF12L2Q5VW00 463 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ASPHD2Q6ICH7 369 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 ANKRD16Q6P6B7 361 aa7.12□□□□□ -1.27
CLIP1-206ENST00000535290 C17orf107Q6ZR85 190 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms