RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 KCNE3Q9Y6H6 103 aa13.47□□□□□ -0.25
BRPF3-210ENST00000532538 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
BRPF3-210ENST00000532538 DPRXA6NFQ7 191 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ZNF814B7Z6K7 855 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 SULT2B1O00204 365 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ABCD4O14678 606 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 TLX2O43763 284 aaPredicted RBP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 EIF4E2O60573 245 aaKnown RBP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 NDUFS7O75251 213 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 LYPLA1O75608 230 aaPredicted RBP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 IGHV4-39P01824 125 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 MATN1P21941 496 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ALDH3A1P30838 453 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 OR3A2P47893 321 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 NUDT6P53370 316 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 MERTKQ12866 999 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 PTGR1Q14914 329 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ARL13AQ5H913 290 aaPredicted RBP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 AGAP6Q5VW22 663 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 IL23RQ5VWK5 629 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 RNF165Q6ZSG1 346 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 C16orf62Q7Z3J2 963 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 GALNT5Q7Z7M9 940 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 DEPDC4Q8N2C3 294 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ZNF563Q8TA94 476 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 SFXN5Q8TD22 340 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 TMEM234Q8WY98 164 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 ADAD1Q96M93 576 aaKnown RBP13.46□□□□□ -0.25
BRPF3-210ENST00000532538 PSD2Q9BQI7 771 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 DUSP26Q9BV47 211 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 BCO1Q9HAY6 547 aa13.46□□□□□ -0.25
BRPF3-210ENST00000532538 DUXAA6NLW8 204 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 CD5LO43866 347 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 NPHS1O60500 1241 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 RAD51DO75771 328 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 CSTAP01040 98 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 IGHV3-9P01782 118 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 FGF4P08620 206 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 PGCP20142 388 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 RPS26P62854 115 aaKnown RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 CSNK2A1P68400 391 aaPredicted RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 CHRNEQ04844 493 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 NRF1Q16656 503 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 PGGHGQ32M88 737 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 CHRFAM7AQ494W8 412 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 SLC22A25Q6T423 547 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 ZCCHC23Q6ZST2 131 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 KRTCAP2Q8N6L1 136 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 OR52N5Q8NH56 324 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 TUBGCP3Q96CW5 907 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 DNAJA3Q96EY1 480 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 SLC35G5Q96KT7 338 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 TRAF4Q9BUZ4 470 aaPredicted RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 MECRQ9BV79 373 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 TRIM2Q9C040 744 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 GPATCH2Q9NW75 528 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 EMC3Q9P0I2 261 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 PCDHGB4Q9UN71 923 aa13.45□□□□□ -0.26
BRPF3-210ENST00000532538 NOSIPQ9Y314 301 aaKnown RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 YLPM1P49750 1951 aaKnown RBP13.45□□□□□ -0.26
BRPF3-210ENST00000532538 SERINC4A6NH21 518 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 A8MV72 311 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-210ENST00000532538 CYTIPO60759 359 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 SPAG7O75391 227 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 PRPS1L1P21108 318 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 IGHV1-2P23083 117 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 DIO1P49895 249 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 ZNF83P51522 516 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 KRTAP1-1Q07627 177 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
BRPF3-210ENST00000532538 TIMM23BQ5SRD1 257 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 CLEC2AQ6UVW9 174 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 SSX8Q7RTT4 187 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 FBXL14Q8N1E6 418 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 APOPT1Q96IL0 206 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 SDF2Q99470 211 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 CACNG6Q9BXT2 260 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-210ENST00000532538 LAT2Q9GZY6 243 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 EXD2Q9NVH0 621 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 MKLN1Q9UL63 735 aa13.44□□□□□ -0.26
BRPF3-210ENST00000532538 SPIN1Q9Y657 262 aaPredicted RBP13.44□□□□□ -0.26
BRPF3-210ENST00000532538 A0A1W2PR80 420 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 M0R1B8 84 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 SMAD9O15198 467 aaKnown RBP13.43□□□□□ -0.26
BRPF3-210ENST00000532538 STX11O75558 287 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 H6PDO95479 791 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 AK1P00568 194 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 CCNA2P20248 432 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 RYKP34925 604 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 FABP6P51161 128 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 CASP9P55211 416 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 SESN3P58005 492 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 RAB35Q15286 201 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 C6orf136Q5SQH8 315 aa13.43□□□□□ -0.26
BRPF3-210ENST00000532538 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms