RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ACAA2P42765 397 aaKnown RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 GSK3BP49841 420 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CRYBA2P53672 197 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 DLX5P56178 289 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CLDN18P56856 261 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 SESN3P58005 492 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 SLC25A3Q00325 362 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 EPS8Q12929 822 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 FOXF1Q12946 379 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 C3P1Q6ZMU1 363 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF550Q7Z398 422 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 FJX1Q86VR8 437 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ULK2Q8IYT8 1036 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 PGAM4Q8N0Y7 254 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 BHLHE22Q8NFJ8 381 aaPredicted RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 TMEM234Q8WY98 164 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 PINK1Q9BXM7 581 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CADM1Q9BY67 442 aaKnown RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ALG2Q9H553 416 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ACER3Q9NUN7 267 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 NDE1Q9NXR1 346 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 ALKBH4Q9NXW9 302 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 GMPR2Q9P2T1 348 aaKnown RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CAMK2AQ9UQM7 478 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 SLC5A6Q9Y289 635 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 MEMO1Q9Y316 297 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 AP4B1Q9Y6B7 739 aa11.67□□□□□ -0.54
SMPD1-202ENST00000526280 FLNBO75369 2602 aaKnown RBP11.67□□□□□ -0.54
SMPD1-202ENST00000526280 CLEC18AA5D8T8 446 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 FIGNL2A6NMB9 653 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 B2RBV5 119 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 E9PLN8 166 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 H3BML4 177 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 GYG2O15488 501 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 GSC2O15499 205 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 UQCRBP14927 111 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 IL11P20809 199 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 ELK4P28324 431 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 PTGER4P35408 488 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 CPOXP36551 454 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 KCNJ5P48544 419 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 IDH2P48735 452 aaKnown RBP11.66□□□□□ -0.54
SMPD1-202ENST00000526280 CLDN15P56746 228 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 RAC1P63000 192 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 SRYQ05066 204 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMPD1-202ENST00000526280 DUSP7Q16829 419 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 RTL6Q6ICC9 239 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 C16orf89Q6UX73 402 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 CLEC18BQ6UXF7 455 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 COMTD1Q86VU5 262 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 SMYD1Q8NB12 490 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 CLEC18CQ8NCF0 446 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 ZNF563Q8TA94 476 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 ZPLD1Q8TCW7 415 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 TAMM41Q96BW9 452 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 DMRTA2Q96SC8 542 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 VKORC1Q9BQB6 163 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 ADA2Q9NZK5 511 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 STOML1Q9UBI4 398 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 ERRFI1Q9UJM3 462 aaPredicted RBP11.66□□□□□ -0.54
SMPD1-202ENST00000526280 PCNX1Q96RV3 2341 aa11.66□□□□□ -0.54
SMPD1-202ENST00000526280 FRS3O43559 492 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 LGI1O95970 557 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 OPN1SWP03999 348 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 C8BP07358 591 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 GP1BBP13224 206 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 PRG2P13727 222 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 CD247P20963 164 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 KDELR2P33947 212 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 SUCLG1P53597 346 aaKnown RBP11.65□□□□□ -0.54
SMPD1-202ENST00000526280 CLDN20P56880 219 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 MXRA7P84157 204 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 MERTKQ12866 999 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 SF3B4Q15427 424 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMPD1-202ENST00000526280 C1orf185Q5T7R7 199 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 PLEKHM3Q6ZWE6 761 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 GRINAQ7Z429 371 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 DEFB107AQ8IZN7 70 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 EID3Q8N140 333 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 LILRA2Q8N149 483 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 RBM15BQ8NDT2 890 aaKnown RBP11.65□□□□□ -0.54
SMPD1-202ENST00000526280 GPR32P1Q8NGA4 272 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 RASSF5Q8WWW0 418 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 CDRT15Q96T59 188 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 KCTD14Q9BQ13 255 aaPredicted RBP11.65□□□□□ -0.54
SMPD1-202ENST00000526280 EVA1AQ9H8M9 152 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 KLHL28Q9NXS3 571 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 TAS2R1Q9NYW7 299 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 FAM215AQ9Y5M1 114 aa11.65□□□□□ -0.54
SMPD1-202ENST00000526280 PHF3Q92576 2039 aaKnown RBP11.64□□□□□ -0.55
SMPD1-202ENST00000526280 USP9XQ93008 2570 aaPredicted RBP11.64□□□□□ -0.55
SMPD1-202ENST00000526280 H0Y3Z8 333 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 H0YC42 278 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 SYT5O00445 386 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 IFNA14P01570 189 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 ME2P23368 584 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 HTR1EP28566 365 aa11.64□□□□□ -0.55
SMPD1-202ENST00000526280 APOBEC1P41238 236 aaKnown RBP11.64□□□□□ -0.55
SMPD1-202ENST00000526280 SLC1A3P43003 542 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms