RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 ZNF836Q6ZNA1 936 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 ESPNLQ6ZVH7 1005 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 NET1Q7Z628 596 aaPredicted RBP17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 SNX32Q86XE0 403 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 PTOV1Q86YD1 416 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 TMEM234Q8WY98 164 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 ZNF845Q96IR2 970 aaPredicted RBP17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 TRIM8Q9BZR9 551 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 MYLK2Q9H1R3 596 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 NANOGQ9H9S0 305 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 RLIMQ9NVW2 624 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 ZNF232Q9UNY5 417 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 IFT52Q9Y366 437 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 ZNF175Q9Y473 711 aa17.77■□□□□ 0.44
EXOSC4-202ENST00000525936 DCHS2Q6V1P9 2916 aa17.77■□□□□ 0.43
EXOSC4-202ENST00000525936 ITPR2Q14571 2701 aa17.77■□□□□ 0.43
EXOSC4-202ENST00000525936 C19orf84I3L1E1 186 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 IL18BPO95998 194 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 CTSSP25774 331 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 SHC1P29353 583 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 ACAA2P42765 397 aaKnown RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 RPS3AP61247 264 aaKnown RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 CYLC2Q14093 348 aaPredicted RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 SLC25A35Q3KQZ1 300 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 REP15Q6BDI9 236 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 CHMP1BQ7LBR1 199 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 MTDHQ86UE4 582 aaKnown RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 MED12LQ86YW9 2145 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 CLIP4Q8N3C7 705 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 NFKBIDQ8NI38 313 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 RP9Q8TA86 221 aaKnown RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 SMPDL3BQ92485 455 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 LRRC58Q96CX6 371 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 SPATA9Q9BWV2 254 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 KCNJ16Q9NPI9 418 aa17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 ZNF443Q9Y2A4 671 aaPredicted RBP17.76■□□□□ 0.43
EXOSC4-202ENST00000525936 SLC22A20A6NK97 555 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 C5orf58C9J3I9 102 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 EIF1AYO14602 144 aaKnown RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 AP3D1O14617 1153 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 OPN1LWP04000 364 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 PABPC4LP0CB38 370 aaKnown RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 IGFBP2P18065 325 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 ME2P23368 584 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 RYKP34925 604 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 GNGT1P63211 74 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 RBBP4Q09028 425 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 FOXF2Q12947 444 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 CAPRIN1Q14444 709 aaKnown RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 LARS2Q15031 903 aaKnown RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 PLEKHM3Q6ZWE6 761 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 PIGWQ7Z7B1 504 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 CPLX4Q7Z7G2 160 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 SERPINA11Q86U17 422 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 ZNF440Q8IYI8 595 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 RELL2Q8NC24 303 aaPredicted RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 OR10D3Q8NH80 312 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 OR2V1Q8NHB1 315 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 FIG4Q92562 907 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 SLC35B4Q969S0 331 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 KLHL15Q96M94 604 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 SLC39A3Q9BRY0 314 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 PINK1Q9BXM7 581 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 TMEM185BQ9H7F4 350 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 RNF122Q9H9V4 155 aa17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 PAQR5Q9NXK6 330 aaPredicted RBP17.75■□□□□ 0.43
EXOSC4-202ENST00000525936 INTS1Q8N201 2190 aaKnown RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 HCFC1P51610 2035 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 NKX2-6A6NCS4 301 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 CFAP73A6NFT4 308 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 MRASO14807 208 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 GCM2O75603 506 aaPredicted RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 CRHP06850 196 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 SLC6A2P23975 617 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 APOBEC1P41238 236 aaKnown RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 PCBP3P57721 371 aaKnown RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 EPS8Q12929 822 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 SELENBP1Q13228 472 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 SCARB2Q14108 478 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 PON3Q15166 354 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 MMEL1Q495T6 779 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 ZNF311Q5JNZ3 666 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 GRINAQ7Z429 371 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 TREML1Q86YW5 311 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 HIPK4Q8NE63 616 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 OR8J3Q8NGG0 315 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 FNDC9Q8TBE3 224 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 ADAM19Q9H013 955 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 FAM107BQ9H098 131 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 NSRP1Q9H0G5 558 aaKnown RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 ENKD1Q9H0I2 346 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 NPDC1Q9NQX5 325 aaPredicted RBP17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 JKAMPQ9P055 326 aa17.74■□□□□ 0.43
EXOSC4-202ENST00000525936 GJE1A6NN92 205 aa17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 FAM90A27PA6NNH2 459 aa17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 DVL2O14641 736 aa17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 TNFSF11O14788 317 aa17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 TMIGD3P0DMS9 266 aaPredicted RBP17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 BMP5P22003 454 aa17.73■□□□□ 0.43
EXOSC4-202ENST00000525936 PRKAR1BP31321 381 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms