RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ING1Q9UK53 422 aaPredicted RBP11.03□□□□□ -0.64
VEGFA-223ENST00000523125 WDR45Q9Y484 360 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 ARID1AO14497 2285 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 ZFHX3Q15911 3703 aa11.03□□□□□ -0.64
VEGFA-223ENST00000523125 A0A1W2PNR3 127 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 CCDC154A6NI56 674 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 TRPC5OSA6NMA1 111 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 GJE1A6NN92 205 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 KLF4O43474 513 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 ADAM11O75078 769 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 CYP7B1O75881 506 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 H6PDO95479 791 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 PGRP06401 933 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 UBTFL6P0CB48 400 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 ENPP1P22413 925 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 HOXC12P31275 282 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 CHI3L1P36222 383 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 KHKP50053 298 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 RIPPLY3P57055 190 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 SELENBP1Q13228 472 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 RNPS1Q15287 305 aaKnown RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 TIGD2Q4W5G0 525 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 SLC9B1Q4ZJI4 515 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 ATAD3BQ5T9A4 648 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 BEND4Q6ZU67 534 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 EIF3MQ7L2H7 374 aaKnown RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 FCRLAQ7L513 359 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 HMGN2P46Q86SG4 172 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 CXorf67Q86X51 503 aaPredicted RBP11.02□□□□□ -0.65
VEGFA-223ENST00000523125 RNF130Q86XS8 419 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 TUSC5Q8IXB3 177 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 ZNF619Q8N2I2 560 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 OIT3Q8WWZ8 545 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 ST8SIA1Q92185 356 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 PANX1Q96RD7 426 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 MANSC1Q9H8J5 431 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 GP6Q9HCN6 339 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 DLL4Q9NR61 685 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 SLC6A13Q9NSD5 602 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 KLHL13Q9P2N7 655 aa11.02□□□□□ -0.65
VEGFA-223ENST00000523125 IGHV3-15A0A0B4J1V0 119 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 GCM2O75603 506 aaPredicted RBP11.01□□□□□ -0.65
VEGFA-223ENST00000523125 PRKD3O94806 890 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 GSNP06396 782 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 PABPC4LP0CB38 370 aaKnown RBP11.01□□□□□ -0.65
VEGFA-223ENST00000523125 PGCP20142 388 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 PSMB1P20618 241 aaKnown RBP11.01□□□□□ -0.65
VEGFA-223ENST00000523125 SLC7A1P30825 629 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 RAC3P60763 192 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 CHRNEQ04844 493 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 MAPK11Q15759 364 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 SYPL1Q16563 259 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 COX20Q5RI15 118 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 ATG16L1Q676U5 607 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 C3orf33Q6P1S2 294 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 GABRG1Q8N1C3 465 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 ANKFN1Q8N957 763 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 WFDC11Q8NEX6 87 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 REXO5Q96IC2 774 aaKnown RBP11.01□□□□□ -0.65
VEGFA-223ENST00000523125 TRNT1Q96Q11 434 aaKnown RBP11.01□□□□□ -0.65
VEGFA-223ENST00000523125 CCDC106Q9BWC9 280 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 SLC38A1Q9H2H9 487 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 BCO1Q9HAY6 547 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 ACER3Q9NUN7 267 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 SLC35A3Q9Y2D2 325 aa11.01□□□□□ -0.65
VEGFA-223ENST00000523125 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 KLF11O14901 512 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 ERLIN1O75477 346 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 YES1P07947 543 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 CHRM4P08173 479 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 IDO1P14902 403 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 PPP3CBP16298 524 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 MVDP53602 400 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 KCNJ10P78508 379 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 MERTKQ12866 999 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 PDCD4Q53EL6 469 aaKnown RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 GPAT3Q53EU6 434 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 TMEM201Q5SNT2 666 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 ZNF621Q6ZSS3 439 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 STK32CQ86UX6 486 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 LSRQ86X29 649 aaPredicted RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 SLC43A2Q8N370 569 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 TMEM234Q8WY98 164 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 CNOT9Q92600 299 aaKnown RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 ZNF75CPQ92670 426 aaPredicted RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 OR5B2Q96R09 309 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 OR52B2Q96RD2 323 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 PSD2Q9BQI7 771 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 ACTR6Q9GZN1 396 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 OR10A4Q9H209 315 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 SDR39U1Q9NRG7 319 aaPredicted RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 BEX4Q9NWD9 120 aaPredicted RBP11□□□□□ -0.65
VEGFA-223ENST00000523125 NKIRAS1Q9NYS0 192 aa11□□□□□ -0.65
VEGFA-223ENST00000523125 GPR52Q9Y2T5 361 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms