RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 DSPPQ9NZW4 1301 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 POLQO75417 2590 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 SPG11Q96JI7 2443 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 A8MXE2 369 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 IL7RP16871 459 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 SFTPDP35247 375 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 KIR2DL2P43627 348 aaPredicted RBP14.69□□□□□ -0.06
PABPC1-221ENST00000522720 CRISP3P54108 245 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 SELENBP1Q13228 472 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 TMEM176BQ3YBM2 270 aaPredicted RBP14.69□□□□□ -0.06
PABPC1-221ENST00000522720 KIF18BQ86Y91 864 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 CNEP1R1Q8N9A8 125 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 CNOT9Q92600 299 aaKnown RBP14.69□□□□□ -0.06
PABPC1-221ENST00000522720 PRRG4Q9BZD6 226 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 CCDC134Q9H6E4 229 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 FGFR1OP2Q9NVK5 253 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 PACSIN3Q9UKS6 424 aa14.69□□□□□ -0.06
PABPC1-221ENST00000522720 MCTS1Q9ULC4 181 aaKnown RBP14.69□□□□□ -0.06
PABPC1-221ENST00000522720 TRBV5-3A0A0A0MS03 114 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TMEM247A6NEH6 219 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 MSTNO14793 375 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 SYNGR4O95473 234 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 BCHEP06276 602 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 VIMP08670 466 aaKnown RBP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TROVE2P10155 538 aaKnown RBP eCLIP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 NID1P14543 1247 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 PPIBP23284 216 aaKnown RBP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 RYKP34925 604 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 KIR2DL3P43628 341 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 GUCY1A3Q02108 690 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TLE4Q04727 773 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 MERTKQ12866 999 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 SNTB1Q13884 538 aaKnown RBP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 GUSBP1Q15486 140 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 VWA1Q6PCB0 445 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 BTLAQ7Z6A9 289 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 LUZP2Q86TE4 346 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 ATP6V1C2Q8NEY4 427 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TSPEARQ8WU66 669 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 WDR60Q8WVS4 1066 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TMEM19Q96HH6 336 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 ZNF559Q9BR84 538 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 RBM24Q9BX46 236 aaKnown RBP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TMEM120AQ9BXJ8 343 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 MCCC2Q9HCC0 563 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 A4GALTQ9NPC4 353 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 TIGARQ9NQ88 270 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 DNAJB12Q9NXW2 375 aaKnown RBP14.68□□□□□ -0.06
PABPC1-221ENST00000522720 VAPAQ9P0L0 249 aa14.68□□□□□ -0.06
PABPC1-221ENST00000522720 ABCA4P78363 2273 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 A0A0G2JPF8 293 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 HNRNPCL2B2RXH8 293 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 HNRNPCL3B7ZW38 293 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 HNRNPCL1O60812 293 aaKnown RBP14.67□□□□□ -0.06
PABPC1-221ENST00000522720 ADAM11O75078 769 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 NUDT7P0C024 238 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 HNRNPCL4P0DMR1 293 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 CPA2P48052 419 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 SORDQ00796 357 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 MYBPHQ13203 477 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 MRPL2Q5T653 305 aaKnown RBP14.67□□□□□ -0.06
PABPC1-221ENST00000522720 PRAMEF8Q5VWM4 474 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 PRAMEF7Q5VXH5 474 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 PPP4R4Q6NUP7 873 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 C3orf33Q6P1S2 294 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 DLEU7Q6UYE1 221 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 PLEKHM3Q6ZWE6 761 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 FAM214BQ7L5A3 538 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 OR52P1PQ8NH57 321 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 ZNF563Q8TA94 476 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 CPNE4Q96A23 557 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-221ENST00000522720 GMPPAQ96IJ6 420 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-221ENST00000522720 BCL2L10Q9HD36 194 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 SERINC1Q9NRX5 453 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 GLRX2Q9NS18 164 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 GALNT8Q9NY28 637 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 LEF1Q9UJU2 399 aaPredicted RBP14.67□□□□□ -0.06
PABPC1-221ENST00000522720 ADAM21Q9UKJ8 722 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 NDUFAF1Q9Y375 327 aa14.67□□□□□ -0.06
PABPC1-221ENST00000522720 CDHR4A6H8M9 788 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 SMNDC1O75940 238 aaKnown RBP eCLIP14.66□□□□□ -0.068e-8■■■■■ 27.3
PABPC1-221ENST00000522720 CGAP01215 116 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 THBS1P07996 1170 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 PABPC4LP0CB38 370 aaKnown RBP14.66□□□□□ -0.06
PABPC1-221ENST00000522720 CD8BP10966 210 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 SLC7A1P30825 629 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 APOBEC1P41238 236 aaKnown RBP14.66□□□□□ -0.06
PABPC1-221ENST00000522720 IDH2P48735 452 aaKnown RBP14.66□□□□□ -0.06
PABPC1-221ENST00000522720 PCYT1AP49585 367 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 ARFIP2P53365 341 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 SIRPAP78324 504 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 ZNF239Q16600 458 aaKnown RBP14.66□□□□□ -0.06
PABPC1-221ENST00000522720 ZSWIM7Q19AV6 140 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 LIN52Q52LA3 116 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 GTF2IRD2BQ6EKJ0 949 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 CGB2Q6NT52 195 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 GRINAQ7Z429 371 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 GTF2IRD2Q86UP8 949 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 VRK2Q86Y07 508 aa14.66□□□□□ -0.06
PABPC1-221ENST00000522720 ZNF440Q8IYI8 595 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms