RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 OR7A2PQ8NGA2 310 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 TWIST2Q8WVJ9 160 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 PPP3R2Q96LZ3 170 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 GATA5Q9BWX5 397 aaPredicted RBP13.16□□□□□ -0.3
PRKDC-204ENST00000521331 GPATCH2Q9NW75 528 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 MGAT4BQ9UQ53 548 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 B3GALT5Q9Y2C3 310 aa13.16□□□□□ -0.3
PRKDC-204ENST00000521331 OR5H1A6NKK0 313 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 SSX4O60224 188 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 TRIM13O60858 407 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 LYPLA1O75608 230 aaPredicted RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 FGF4P08620 206 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 IGHV1-2P23083 117 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 CCR4P51679 360 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 CSNK2A1P68400 391 aaPredicted RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 NDUFAF6Q330K2 333 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 GLIPR1L2Q4G1C9 344 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 TIGD2Q4W5G0 525 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 BHLHB9Q6PI77 547 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 CLEC2AQ6UVW9 174 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 TMEM108Q6UXF1 575 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 OR2W6PQ8NHA6 318 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 RFWD2Q8NHY2 731 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 NANOS1Q8WY41 292 aaKnown RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 ST8SIA1Q92185 356 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 OR5B2Q96R09 309 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 ZNF300Q96RE9 604 aaPredicted RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 PRPF18Q99633 342 aaKnown RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 NMUR2Q9GZQ4 415 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 ANKZF1Q9H8Y5 726 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 EML4Q9HC35 981 aaKnown RBP13.15□□□□□ -0.3
PRKDC-204ENST00000521331 SERINC1Q9NRX5 453 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 NPAP1Q9NZP6 1156 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 EMC3Q9P0I2 261 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 CDC42EP3Q9UKI2 254 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 KCNE3Q9Y6H6 103 aa13.15□□□□□ -0.3
PRKDC-204ENST00000521331 IGHV4-30-2A0A087WSY4 118 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 SERINC4A6NH21 518 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 C9JVG2 144 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 PIP5K1BO14986 540 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 DNAJA2O60884 412 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 H6PDO95479 791 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 C6orf47O95873 294 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 FAM157CP0CG43 387 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 KRT4P19013 534 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 PCLAFQ15004 111 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 PDK3Q15120 406 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 PDZK1Q5T2W1 519 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 C6orf52Q5T4I8 152 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 KLHL17Q6TDP4 642 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 TMPPEQ6ZT21 453 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF433Q8N7K0 673 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-204ENST00000521331 OR10H5Q8NGA6 315 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 SLC25A43Q8WUT9 341 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-204ENST00000521331 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF775Q96BV0 537 aaPredicted RBP13.14□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 OR7D2Q96RA2 312 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 DHRS9Q9BPW9 319 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 CACNG6Q9BXT2 260 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 LAT2Q9GZY6 243 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 CBLN4Q9NTU7 201 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 TRAF6Q9Y4K3 522 aa13.14□□□□□ -0.31
PRKDC-204ENST00000521331 CUBNO60494 3623 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 FREM1Q5H8C1 2179 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 IGKV3D-15A0A087WSY6 115 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 A0A096LNT2 108 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 FAM234BA2RU67 622 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 TMEM233B4DJY2 109 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 NPHS1O60500 1241 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 AK1P00568 194 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 EDNRAP25101 427 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 PTAFRP25105 342 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 TTKP33981 857 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 DIO1P49895 249 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 LOXL1Q08397 574 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 SKP2Q13309 424 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 PTGR1Q14914 329 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 TMEM249Q2WGJ8 235 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 UGT3A2Q3SY77 523 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 ATP6AP1LQ52LC2 224 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 FBXW9Q5XUX1 488 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 ABLIM2Q6H8Q1 611 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 C11orf71Q6IPW1 123 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 SLC22A25Q6T423 547 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 MTDHQ86UE4 582 aaKnown RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 FBXL14Q8N1E6 418 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 COQ8BQ96D53 544 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 TNFRSF13CQ96RJ3 184 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 SDF2Q99470 211 aa13.13□□□□□ -0.31
PRKDC-204ENST00000521331 THUMPD3Q9BV44 507 aaKnown RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 BHLHE41Q9C0J9 482 aaPredicted RBP13.13□□□□□ -0.31
PRKDC-204ENST00000521331 QRSL1Q9H0R6 528 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms