RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 ZDHHC6Q9H6R6 413 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 MEAF6Q9HAF1 191 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 RNPEPL1Q9HAU8 725 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 EML4Q9HC35 981 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SYTL2Q9HCH5 934 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 IL26Q9NPH9 171 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 GTSE1Q9NYZ3 720 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TRMT6Q9UJA5 497 aaKnown RBP3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 GNPTGQ9UJJ9 305 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 STUB1Q9UNE7 303 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 ERVW-1Q9UQF0 538 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 DHRS7Q9Y394 339 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 PPIL1Q9Y3C6 166 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 FIS1Q9Y3D6 152 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 CDH23Q9H251 3354 aa3.29□□□□□ -1.88
CTHRC1-204ENST00000520880 TRANK1O15050 2925 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 DOCK9Q9BZ29 2069 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 IGLV3-16A0A075B6K0 115 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 GLYATL1P3A0A0U1RQE8 302 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 FEZF1A0PJY2 475 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TSPAN11A1L157 253 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SYCE1LA8MT33 242 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 AGAP14A8MT82 685 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 A8MX80 341 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 E5RI56 91 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 E2F3O00716 465 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC9A3R1O14745 358 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ENTPD5O75356 428 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SUPT7LO94864 414 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 POP4O95707 220 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT2B4P06133 528 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CTSLP07711 333 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CISD3P0C7P0 127 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PRG2P13727 222 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 GFAPP14136 432 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 FOLR2P14207 255 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF7P17097 686 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT1A6P19224 532 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 EEF1DP29692 281 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT1A3P35503 534 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT1A5P35504 534 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 MNDAP41218 407 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SPINT3P49223 89 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 NUDT2P50583 147 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ATP4BP51164 291 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CDH13P55290 713 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 FOXA1P55317 472 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ARF3P61204 181 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ARF1P84077 181 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SEMG2Q02383 582 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ZFP36L1Q07352 338 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 RALGDSQ12967 914 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 GPM6BQ13491 265 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CUL3Q13618 768 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 DMC1Q14565 340 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TGFBIQ15582 683 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PPP1R3AQ16821 1122 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 C15orf32Q32M92 178 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 GPR33Q49SQ1 333 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CARD16Q5EG05 197 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ACSBG2Q5FVE4 666 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 FBXO48Q5FWF7 155 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 LRRC73Q5JTD7 316 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 LCN1P1Q5VSP4 162 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 LYPLAL1Q5VWZ2 237 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 LRRC66Q68CR7 880 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PTRHD1Q6GMV3 140 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 UGT3A1Q6NUS8 523 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TEX38Q6PEX7 206 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SBSNQ6UWP8 590 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 MACC1Q6ZN28 852 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 NET1Q7Z628 596 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SNX32Q86XE0 403 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ABHD12Q8N2K0 398 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF557Q8N988 423 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 VN1R2Q8NFZ6 395 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 OR2A12Q8NGT7 310 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 NAT14Q8WUY8 206 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TWIST2Q8WVJ9 160 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 RCN3Q96D15 328 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CMTM5Q96DZ9 223 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 C19orf60Q96EN9 201 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PDLIM5Q96HC4 596 aaKnown RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF641Q96N77 438 aaPredicted RBP3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PANX3Q96QZ0 392 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CHCHD6Q9BRQ6 235 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 THTPAQ9BU02 230 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC2A11Q9BYW1 496 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TUBB1Q9H4B7 451 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ASB8Q9H765 288 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 MID1IP1Q9NPA3 183 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 SLC7A8Q9UHI5 535 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 CRLS1Q9UJA2 301 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 ZNF225Q9UK10 706 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 APPL1Q9UKG1 709 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 PCTPQ9UKL6 214 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 TMCO1Q9UM00 188 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 L3MBTL1Q9Y468 752 aa3.28□□□□□ -1.88
CTHRC1-204ENST00000520880 DNAJC15Q9Y5T4 150 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms