RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CNTN2Q02246 1040 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 PJVKQ0ZLH3 352 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 CCDC57Q2TAC2 916 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 RIPPLY2Q5TAB7 128 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 NCR3LG1Q68D85 454 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 FAM71F2Q6NXP2 309 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 ZSCAN30Q86W11 494 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 RNF175Q8N4F7 328 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 C20orf203Q8NBC4 194 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 NEIL3Q8TAT5 605 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 FBXO30Q8TB52 745 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 THUMPD2Q9BTF0 503 aaKnown RBP3.97□□□□□ -1.77
PTPN12-213ENST00000519553 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
PTPN12-213ENST00000519553 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 AIPL1Q9NZN9 384 aa3.97□□□□□ -1.77
PTPN12-213ENST00000519553 THSD7BQ9C0I4 1608 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 A0A0G2JRQ6 117 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 A0A1W2PNV4 684 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 KIF2AO00139 706 aaPredicted RBP3.96□□□□□ -1.78
PTPN12-213ENST00000519553 TRAF3IP2O43734 574 aaPredicted RBP3.96□□□□□ -1.78
PTPN12-213ENST00000519553 ECI2O75521 394 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 UGT2B17O75795 530 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 BBOX1O75936 387 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 H2BFMP0C1H6 154 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 PRG2P13727 222 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 CALB2P22676 271 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 APOC4P55056 127 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 NUP107P57740 925 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 CHRNB3Q05901 458 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 ARCQ7LC44 396 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 NRMQ8IXM6 262 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 OR10T2Q8NGX3 314 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 OR56B4Q8NH76 319 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 SPRYD4Q8WW59 207 aaPredicted RBP3.96□□□□□ -1.78
PTPN12-213ENST00000519553 RHBGQ9H310 441 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 LIN28AQ9H9Z2 209 aaKnown RBP3.96□□□□□ -1.78
PTPN12-213ENST00000519553 UGT2A1Q9Y4X1 527 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 PLEKHG1Q9ULL1 1385 aa3.96□□□□□ -1.78
PTPN12-213ENST00000519553 TRIM49D1C9J1S8 452 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 HCRTR1O43613 425 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CD1BP29016 333 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CA8P35219 290 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 LEPP41159 167 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 AP3M2P53677 418 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 HSPA2P54652 639 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CCDC173Q0VFZ6 552 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 MXD4Q14582 209 aaPredicted RBP3.95□□□□□ -1.78
PTPN12-213ENST00000519553 KRTAP13-3Q3SY46 172 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 USH1GQ495M9 461 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 GGTA1PQ4G0N0 100 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF658BQ4V348 819 aaPredicted RBP3.95□□□□□ -1.78
PTPN12-213ENST00000519553 PYHIN1Q6K0P9 492 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 TPRA1Q86W33 373 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 VRK2Q86Y07 508 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CLDN19Q8N6F1 224 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 DCAF4L2Q8NA75 395 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 OR10A7Q8NGE5 316 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CHCHD10Q8WYQ3 142 aaPredicted RBP3.95□□□□□ -1.78
PTPN12-213ENST00000519553 RPL3LQ92901 407 aaKnown RBP3.95□□□□□ -1.78
PTPN12-213ENST00000519553 RIT2Q99578 217 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 TMEM117Q9H0C3 514 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 NANOGQ9H9S0 305 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 APMAPQ9HDC9 416 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 CHRNA9Q9UGM1 479 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 ERVW-1Q9UQF0 538 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 RASD1Q9Y272 281 aa3.95□□□□□ -1.78
PTPN12-213ENST00000519553 A0A1B0GWJ7 208 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 SMPD2O60906 423 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 NPIPB7O75200 414 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF780AO75290 641 aaPredicted RBP3.94□□□□□ -1.78
PTPN12-213ENST00000519553 DRD5P21918 477 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 PAX7P23759 505 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 HTR1EP28566 365 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 CTRLP40313 264 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 PLK1P53350 603 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 TIMM10P62072 90 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 MKXQ8IYA7 352 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 DHRSXQ8N5I4 330 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 PGLYRP4Q96LB8 373 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 NXF3Q9H4D5 531 aaKnown RBP3.94□□□□□ -1.78
PTPN12-213ENST00000519553 NARFLQ9H6Q4 476 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 MAD1L1Q9Y6D9 718 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 GTF3C1Q12789 2109 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 TTC21BQ7Z4L5 1316 aa3.94□□□□□ -1.78
PTPN12-213ENST00000519553 HOXC4P09017 264 aaPredicted RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 EPB41P11171 864 aaKnown RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 ACAA2P42765 397 aaKnown RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 HNRNPA3P51991 378 aaKnown RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 BIDP55957 195 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 CCDC137Q6PK04 289 aaKnown RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 ACOT1Q86TX2 421 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF433Q8N7K0 673 aaPredicted RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 SUMF2Q8NBJ7 301 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 CATSPER1Q8NEC5 780 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 DNAJA4Q8WW22 397 aaPredicted RBP3.93□□□□□ -1.78
PTPN12-213ENST00000519553 MYDGFQ969H8 173 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 TBX15Q96SF7 602 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 GAL3ST1Q99999 423 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 ZNF670Q9BS34 389 aa3.93□□□□□ -1.78
PTPN12-213ENST00000519553 SLC35A5Q9BS91 424 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms