RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 B3GNT6Q6ZMB0 384 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 NDUFAF7Q7L592 441 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 VASH2Q86V25 355 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 DTX1Q86Y01 620 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 OR8D4Q8NGM9 314 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 EFHD2Q96C19 240 aaPredicted RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 IL4I1Q96RQ9 567 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 COPS4Q9BT78 406 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 NAA50Q9GZZ1 169 aaKnown RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 PTTG2Q9NZH5 202 aa13.28□□□□□ -0.28
CLN8-204ENST00000519254 PPIEQ9UNP9 301 aaKnown RBP13.28□□□□□ -0.28
CLN8-204ENST00000519254 SH3D21A4FU49 640 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 FRG2CA6NGY1 282 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 IL33O95760 270 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 ACVR2AP27037 513 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 PCSK6P29122 969 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 GPR4P46093 362 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 EFNB1P98172 346 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 MVKQ03426 396 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 ZSWIM7Q19AV6 140 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 ZNF613Q6PF04 617 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 CASP12Q6UXS9 341 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 C16orf47Q6ZP98 133 aaPredicted RBP13.27□□□□□ -0.28
CLN8-204ENST00000519254 CMIPQ8IY22 773 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 ZNF420Q8TAQ5 688 aaPredicted RBP13.27□□□□□ -0.28
CLN8-204ENST00000519254 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.28
CLN8-204ENST00000519254 SLC35B4Q969S0 331 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 DOK1Q99704 481 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 TMEM27Q9HBJ8 222 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 SLC25A19Q9HC21 320 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 CLN6Q9NWW5 311 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 GPR83Q9NYM4 423 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 FBXL4Q9UKA2 621 aa13.27□□□□□ -0.28
CLN8-204ENST00000519254 MPDZO75970 2070 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 A0A0B4J2E0 115 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 A0A1B0GWA3 101 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 A0A1B0GX12 115 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 SERINC4A6NH21 518 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 ZNF99A8MXY4 864 aaPredicted RBP13.27□□□□□ -0.29
CLN8-204ENST00000519254 CDC42EP2O14613 210 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 ENTPD6O75354 484 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 CDK1P06493 297 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 LIFP15018 202 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 C21orf33P30042 268 aaPredicted RBP13.27□□□□□ -0.29
CLN8-204ENST00000519254 DCAF7P61962 342 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 EXT1Q16394 746 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 NDUFAF6Q330K2 333 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 TMEM201Q5SNT2 666 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 MRGPREQ86SM8 312 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 RAB43Q86YS6 212 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 RNF113BQ8IZP6 322 aaKnown RBP13.27□□□□□ -0.29
CLN8-204ENST00000519254 TCEANCQ8N8B7 351 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 TMEM239Q8WW34 195 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 MYDGFQ969H8 173 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 C12orf43Q96C57 262 aaKnown RBP13.27□□□□□ -0.29
CLN8-204ENST00000519254 IMMP1LQ96LU5 166 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 SCNM1Q9BWG6 230 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 ACOT13Q9NPJ3 140 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 P4HTMQ9NXG6 502 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 TVP23BQ9NYZ1 205 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 SELENONQ9NZV5 590 aa13.27□□□□□ -0.29
CLN8-204ENST00000519254 EXPH5Q8NEV8 1989 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 PCNX3Q9H6A9 2034 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 WWP2O00308 870 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 PRKYO43930 277 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 FADS2O95864 444 aaKnown RBP13.26□□□□□ -0.29
CLN8-204ENST00000519254 CSTAP01040 98 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 SLC15A1P46059 708 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 PLCXD2Q0VAA5 305 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 ATP1A4Q13733 1029 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 FNDC7Q5VTL7 733 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 ALDH16A1Q8IZ83 802 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 SVOPQ8N4V2 548 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 LSMEM1Q8N8F7 131 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 ZNF441Q8N8Z8 693 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 OR8J1Q8NGP2 316 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 PFN4Q8NHR9 129 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 FGF11Q92914 225 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 POLDIP3Q9BY77 421 aaKnown RBP13.26□□□□□ -0.29
CLN8-204ENST00000519254 TRIM2Q9C040 744 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 IL20Q9NYY1 176 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 AHCTF1Q8WYP5 2266 aa13.26□□□□□ -0.29
CLN8-204ENST00000519254 H3BMQ9 156 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 CHP2O43745 196 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 MAN1A2O60476 641 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 REM1O75628 298 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 ZFAND5O76080 213 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 STSP08842 583 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 MAKP20794 623 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 PCYT1AP49585 367 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 SMSP52788 366 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 PRKCDQ05655 676 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 SRSF6Q13247 344 aaKnown RBP13.25□□□□□ -0.29
CLN8-204ENST00000519254 OCLNQ16625 522 aa13.25□□□□□ -0.29
CLN8-204ENST00000519254 SYT6Q5T7P8 510 aaPredicted RBP13.25□□□□□ -0.29
CLN8-204ENST00000519254 PLAG1Q6DJT9 500 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms