RNA–Protein interactions for RNA: ENST00000516183.1

SCARNA17-201, small Cajal body-specific RNA 17, humanhuman

BASIC

Gene SCARNA17, Length 144 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA17-201ENST00000516183 BMP10O95393 424 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PTBP3O95758 552 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 DDX58O95786 925 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CD160O95971 181 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MBD3O95983 291 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 GH1P01241 217 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 IGLV3-1P01715 115 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 IGHV4-59P01825 116 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TFRCP02786 760 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 VTNP04004 478 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SHBGP04278 402 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ATP1A1P05023 1023 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 P4HBP07237 508 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 OR8U8P0C7N1 319 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ZNF705DP0CH99 300 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ZNF705BP0CI00 300 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PYGMP11217 842 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 UGT1A6P19224 532 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MSH3P20585 1137 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 M6PRP20645 277 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MUTP22033 750 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 GADD45AP24522 165 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ATP5A1P25705 553 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 NDUFS1P28331 727 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 HTR1EP28566 365 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 EPHA2P29317 976 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PTGER4P35408 488 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PGM1P36871 562 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MYCNOSP40205 109 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MLH1P40692 756 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 WNT5AP41221 380 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CA7P43166 264 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CTSKP43235 329 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MAGEA2P43356 314 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 KCNJ1P48048 391 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 KCNJ6P48051 423 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 POLD2P49005 469 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 NR2C2P49116 596 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MTNR1BP49286 362 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MRPL19P49406 292 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 NT5C2P49902 561 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 KHKP50053 298 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ATP1A2P50993 1020 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 RPS6KA3P51812 740 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MNAT1P51948 309 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CHN2P52757 468 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 COPB1P53618 953 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CASP6P55212 293 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TCL1AP56279 114 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 STX17P56962 302 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 DCDC1P59894 354 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ST8SIA6P61647 398 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 RPS11P62280 158 aaKnown RBP eCLIP-1□□□□□ -2.573e-11■□□□□ 9.1
SCARNA17-201ENST00000516183 RPS26P62854 115 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 EIF5AP63241 154 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TUBB4BP68371 445 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CYP4F2P78329 520 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ARHGAP8P85298 464 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CEBPZQ03701 1054 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 RNASELQ05823 741 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TYRO3Q06418 890 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 LGALS3BPQ08380 585 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CCDC15Q0P6D6 951 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 AIMP1Q12904 312 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 BNIP2Q12982 314 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MFAP5Q13361 173 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TUSC3Q13454 348 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SQLEQ14534 574 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MXD4Q14582 209 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SEPT2Q15019 361 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ACAP2Q15057 778 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PDK3Q15120 406 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MLF2Q15773 248 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 E2F4Q16254 413 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SLC15A2Q16348 729 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 NRF1Q16656 503 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CCL15Q16663 113 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 HAGHQ16775 308 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 DDR2Q16832 855 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CCDC144BQ3MJ40 725 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SMUG1Q53HV7 270 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 C19orf54Q5BKX5 351 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MDH1BQ5I0G3 518 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 C3orf38Q5JPI3 329 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PPP1R15BQ5SWA1 713 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 CFAP70Q5T0N1 1121 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 AXDND1Q5T1B0 1012 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 DDX59Q5T1V6 619 aaKnown RBP eCLIP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 ERMARDQ5T6L9 678 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 WLSQ5T9L3 541 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PXDC1Q5TGL8 231 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 FAM78BQ5VT40 261 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 PRAMEF20Q5VT98 475 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 C9orf135Q5VTT2 229 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 RRAGBQ5VZM2 374 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 RNF219Q5W0B1 726 aaPredicted RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 TMEM236Q5W0B7 351 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 INTS3Q68E01 1043 aaKnown RBP-1□□□□□ -2.57
SCARNA17-201ENST00000516183 MCTP2Q6DN12 878 aa-1□□□□□ -2.57
SCARNA17-201ENST00000516183 SIGIRRQ6IA17 410 aa-1□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms