RNA–Protein interactions for RNA: ENST00000516145.1

RNU6-496P-201, Transcript of RNA, U6 small nuclear 496, pseudogene, humanhuman

BASIC

Gene RNU6-496P, Length 99 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-496P-201ENST00000516145 DEFB118Q96PH6 123 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 GBP5Q96PP8 586 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 OR2M2Q96R28 347 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 HDHD3Q9BSH5 251 aaPredicted RBP0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 UPF3BQ9BZI7 483 aaKnown RBP0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 ULBP2Q9BZM5 246 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 ZNF350Q9GZX5 532 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 GDAP2Q9NXN4 497 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 ZNF229Q9UJW7 825 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 UBIAD1Q9Y5Z9 338 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 RFNGQ9Y644 331 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 TTC21BQ7Z4L5 1316 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 SH3TC1Q8TE82 1336 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 DCHS1Q96JQ0 3298 aa0.78□□□□□ -2.28
RNU6-496P-201ENST00000516145 COL4A6Q14031 1691 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 ANKRD26Q9UPS8 1709 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 LTN1O94822 1766 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 LAMB1P07942 1786 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 LAMA2P24043 3122 aaKnown RBP0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 CCDC88AQ3V6T2 1871 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 WDFY4Q6ZS81 3184 aa0.78□□□□□ -2.29
RNU6-496P-201ENST00000516145 AKAP11Q9UKA4 1901 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 TENM1Q9UKZ4 2725 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 SPEGQ15772 3267 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 K7N7A8 449 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 RHOXF2BP0C7M4 288 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 HNF1AP20823 631 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 UQCRC2P22695 453 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 AQP1P29972 269 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 ARFRP1Q13795 201 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 LRRC26Q2I0M4 334 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 CCDC57Q2TAC2 916 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 TEX44Q53QW1 395 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 LY6G6FQ5SQ64 297 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 UNC5DQ6UXZ4 953 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 ACP7Q6ZNF0 438 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 RANBP3LQ86VV4 465 aaPredicted RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 CCDC83Q8IWF9 413 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 STHQ8IWL8 128 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 SKA3Q8IX90 412 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 AENQ8WTP8 325 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 OR1E3Q8WZA6 343 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 CORO2AQ92828 525 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 RPUSD4Q96CM3 377 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 TMEM80Q96HE8 168 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 TSPAN18Q96SJ8 248 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 COQ7Q99807 217 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 CENPOQ9BU64 300 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 POLR2J2Q9GZM3 115 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 POLR2J3Q9H1A7 115 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 EML4Q9HC35 981 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 TUFT1Q9NNX1 390 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 LHX9Q9NQ69 397 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 DCAF13Q9NV06 445 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 C6orf203Q9P0P8 240 aaPredicted RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 ARMCX3Q9UH62 379 aaPredicted RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 SWAP70Q9UH65 585 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 NUFIP1Q9UHK0 495 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 DUSP12Q9UNI6 340 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 KLHDC2Q9Y2U9 406 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 CARHSP1Q9Y2V2 147 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 WDR45Q9Y484 360 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 POMT1Q9Y6A1 747 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 MTCH2Q9Y6C9 303 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 A0A1W2PP64 1363 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 NCAPD2Q15021 1401 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 RIC1Q4ADV7 1423 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 LRRC37A2A6NM11 1700 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 AFDNP55196 1824 aaKnown RBP0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 SLX4Q8IY92 1834 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 ANKRD31Q8N7Z5 1873 aa0.77□□□□□ -2.29
RNU6-496P-201ENST00000516145 LAMA3Q16787 3333 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 CFAP54Q96N23 3096 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 RTL1A6NKG5 1358 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 FLT4P35916 1363 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 GRIN2DO15399 1336 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 TRAV40A0A0B4J280 105 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 A0A1B0GUL7 405 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 OOEPA6NGQ2 149 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SAGE2PA6NJ88 616 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SH3BP5O60239 455 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 HCN1O60741 890 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 KIAA0754O94854 1291 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 CTDNEP1O95476 244 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SLC16A8O95907 504 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 PNPP00491 289 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 HSP90AB1P08238 724 aaKnown RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 IL9P15248 144 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 KRT20P35900 424 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 RPL4P36578 427 aaKnown RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SH3BGRP55822 239 aaPredicted RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 CACNG7P62955 275 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SCN1BQ07699 218 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 ZKSCAN8Q15776 578 aaPredicted RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 CWC27Q6UX04 472 aaKnown RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 CLEC4GQ6UXB4 293 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 SLC22A16Q86VW1 577 aa0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 C17orf82Q86X59 251 aaPredicted RBP0.76□□□□□ -2.29
RNU6-496P-201ENST00000516145 NBPF5PQ86XG9 351 aaPredicted RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms