RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	RFC2	P35250	354 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	PTGFR	P43088	359 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	MYBPC1	Q00872	1141 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	BTG3	Q14201	252 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	RCN1	Q15293	331 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	TPD52L1	Q16890	204 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	CCDC57	Q2TAC2	916 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	AGK	Q53H12	422 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	TFDP3	Q5H9I0	405 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	RABGAP1L	Q5R372	815 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	IL23R	Q5VWK5	629 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	ASPHD2	Q6ICH7	369 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CXCL17	Q6UXB2	119 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	HACD2	Q6Y1H2	254 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	OTUD6A	Q7L8S5	288 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	VPS36	Q86VN1	386 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	H1FOO	Q8IZA3	346 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	GCNT2	Q8N0V5	402 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NFAM1	Q8NET5	270 aa	Predicted RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	PHYHIP	Q92561	330 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NEIL2	Q969S2	332 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NCLN	Q969V3	563 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	GSDMA	Q96QA5	445 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	PLEKHF1	Q96S99	279 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	NACA2	Q9H009	215 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	METTL7A	Q9H8H3	244 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CALHM2	Q9HA72	323 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	PNO1	Q9NRX1	252 aa	Known RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	ETNK2	Q9NVF9	386 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	MARCH5	Q9NX47	278 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	ONECUT1	Q9UBC0	465 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	AP4B1	Q9Y6B7	739 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	SLCO1B1	Q9Y6L6	691 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	SF3B1	O75533	1304 aa	Known RBP eCLIP	2.57	□□□□□ -2
MATR3-223	ENST00000514402	ANKRD30B	Q9BXX2	1392 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	CUX2	O14529	1486 aa		2.57	□□□□□ -2
MATR3-223	ENST00000514402	IGHV7-81	A0A0B4J1V7	117 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	SERTM2	A0A1B0GWG4	89 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	GOLGA8O	A6NCC3	632 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	HELT	A6NFD8	242 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402		A8MUI8	341 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	GOLGA8N	F8WBI6	632 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	SDHD	O14521	159 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CTAGE5	O15320	804 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CACNG3	O60359	315 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	ANP32D	O95626	131 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CHRNA1	P02708	482 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	FGF4	P08620	206 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	UQCRFS1P1	P0C7P4	283 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	HTR2A	P28223	471 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CA8	P35219	290 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	RFC4	P35249	363 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CHI3L1	P36222	383 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	RGS4	P49798	205 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	ATP5I	P56385	69 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	RND3	P61587	244 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	DMTN	Q08495	405 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	EGFEM1P	Q0D2K5	195 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	ZP4	Q12836	540 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	TRIP10	Q15642	601 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	KCTD19	Q17RG1	926 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	LRIT3	Q3SXY7	679 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	TEX44	Q53QW1	395 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	BEND6	Q5SZJ8	279 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	LIPK	Q5VXJ0	399 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	METAP1D	Q6UB28	335 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	CLEC2A	Q6UVW9	174 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	IL34	Q6ZMJ4	242 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	PAQR9	Q6ZVX9	377 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	EFL1	Q7Z2Z2	1120 aa	Known RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	NET1	Q7Z628	596 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	ZNF100	Q8IYN0	542 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	BHLHE23	Q8NDY6	225 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	RLN3	Q8WXF3	142 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	OSTF1	Q92882	214 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	NT5C3B	Q969T7	300 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	SENP8	Q96LD8	212 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	PLIN2	Q99541	437 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	ALG12	Q9BV10	488 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	CLSTN2	Q9H4D0	955 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	COG4	Q9H9E3	785 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	RPRD1B	Q9NQG5	326 aa	Known RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	ZNF331	Q9NQX6	463 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	RAB20	Q9NX57	234 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	PSME2	Q9UL46	239 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	ZNF490	Q9ULM2	529 aa	Predicted RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	FOXJ3	Q9UPW0	622 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	MRPS33	Q9Y291	106 aa	Known RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	KIF16B	Q96L93	1317 aa		2.56	□□□□□ -2
MATR3-223	ENST00000514402	EIF4G1	Q04637	1599 aa	Known RBP	2.56	□□□□□ -2
MATR3-223	ENST00000514402	IGLV3-16	A0A075B6K0	115 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	GOLGA6L7	A0A1B0GV03	622 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	LINC00854	A0A1B0GVQ3	168 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402		K7ENP7	123 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402		L7N2F9	121 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	DNALI1	O14645	258 aa	Predicted RBP	2.55	□□□□□ -2
MATR3-223	ENST00000514402	ZNF208	O43345	1280 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	ZNF254	O75437	659 aa		2.55	□□□□□ -2
MATR3-223	ENST00000514402	ECI2	O75521	394 aa		2.55	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms