RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 HNRNPCL4P0DMR1 293 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 PRF1P14222 555 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 SLC7A1P30825 629 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 CPA2P48052 419 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 CARD18P57730 90 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 EEF1A1P68104 462 aaKnown RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 SIRPAP78324 504 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 SNTB1Q13884 538 aaKnown RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 NFYCQ13952 458 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 LARS2Q15031 903 aaKnown RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 SLC25A53Q5H9E4 307 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 MRPL2Q5T653 305 aaKnown RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 EEF1A1P5Q5VTE0 462 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 C3orf33Q6P1S2 294 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 DLEU7Q6UYE1 221 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 GDF7Q7Z4P5 450 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 DMRTC2Q8IXT2 367 aaPredicted RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 TSPEARQ8WU66 669 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 RNF122Q9H9V4 155 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 TIGARQ9NQ88 270 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 ACER3Q9NUN7 267 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 MRGBPQ9NV56 204 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 DNAJB12Q9NXW2 375 aaKnown RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 DSPPQ9NZW4 1301 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 KLHL14Q9P2G3 628 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 ZNF232Q9UNY5 417 aa14.28□□□□□ -0.12
DDX41-214ENST00000512334 ZNF443Q9Y2A4 671 aaPredicted RBP14.28□□□□□ -0.12
DDX41-214ENST00000512334 PKDREJQ9NTG1 2253 aa14.27□□□□□ -0.12
DDX41-214ENST00000512334 CRYBG3Q68DQ2 2970 aa14.27□□□□□ -0.12
DDX41-214ENST00000512334 TRBV5-3A0A0A0MS03 114 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 SYT5O00445 386 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 DNAJA2O60884 412 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 SMNDC1O75940 238 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX41-214ENST00000512334 CRHP06850 196 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 ARAFP10398 606 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 BMP2P12643 396 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 UQCRBP14927 111 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 IGFBP2P18065 325 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 IDH2P48735 452 aaKnown RBP14.27□□□□□ -0.13
DDX41-214ENST00000512334 PLAURQ03405 335 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 ZNF836Q6ZNA1 936 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 RETREG3Q86VR2 466 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 ACBD4Q8NC06 268 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 NFKBIDQ8NI38 313 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 BBS10Q8TAM1 723 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 RNASE6Q93091 150 aaKnown RBP14.27□□□□□ -0.13
DDX41-214ENST00000512334 REXO5Q96IC2 774 aaKnown RBP14.27□□□□□ -0.13
DDX41-214ENST00000512334 CPPED1Q9BRF8 314 aaPredicted RBP14.27□□□□□ -0.13
DDX41-214ENST00000512334 TRIM8Q9BZR9 551 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 PIGMQ9H3S5 423 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 IKZF5Q9H5V7 419 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 ARMC7Q9H6L4 198 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 RLIMQ9NVW2 624 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 PACSIN3Q9UKS6 424 aa14.27□□□□□ -0.13
DDX41-214ENST00000512334 CFAP73A6NFT4 308 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 ETV2O00321 342 aaPredicted RBP14.26□□□□□ -0.13
DDX41-214ENST00000512334 AP3D1O14617 1153 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 ADAM11O75078 769 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 TNFSF13O75888 250 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 PGM3O95394 542 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 DLX5P56178 289 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 CDK6Q00534 326 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 KLF10Q13118 480 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 MYBPHQ13203 477 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 MMEL1Q495T6 779 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 RUNDC3AQ59EK9 446 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 PRAMEF8Q5VWM4 474 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 PRAMEF7Q5VXH5 474 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 VWA1Q6PCB0 445 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 GRINAQ7Z429 371 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 ZNF440Q8IYI8 595 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 C10orf111Q8N326 155 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 DPP10Q8N608 796 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 ROBO4Q8WZ75 1007 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 CPNE4Q96A23 557 aaPredicted RBP14.26□□□□□ -0.13
DDX41-214ENST00000512334 ZNF317Q96PQ6 595 aaPredicted RBP14.26□□□□□ -0.13
DDX41-214ENST00000512334 OR5B2Q96R09 309 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 CGREF1Q99674 301 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 RBM24Q9BX46 236 aaKnown RBP14.26□□□□□ -0.13
DDX41-214ENST00000512334 SAR1AQ9NR31 198 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 CTPS2Q9NRF8 586 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 FOXD3Q9UJU5 478 aaPredicted RBP14.26□□□□□ -0.13
DDX41-214ENST00000512334 CLEC4AQ9UMR7 237 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 IFT52Q9Y366 437 aa14.26□□□□□ -0.13
DDX41-214ENST00000512334 ADGRG4Q8IZF6 3080 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 A0A1W2PNR3 127 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 CDHR4A6H8M9 788 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 THBS1P07996 1170 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 GKN3PP0CG01 181 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 TFPIP10646 304 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 GPX2P18283 190 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 CCNA2P20248 432 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 SLC6A2P23975 617 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 CPOXP36551 454 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 APOBEC1P41238 236 aaKnown RBP14.25□□□□□ -0.13
DDX41-214ENST00000512334 KIR2DL2P43627 348 aaPredicted RBP14.25□□□□□ -0.13
DDX41-214ENST00000512334 CTBP2P56545 445 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 MTPNP58546 118 aa14.25□□□□□ -0.13
DDX41-214ENST00000512334 SCARB2Q14108 478 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms