RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	COL6A6	A6NMZ7	2263 aa		13.15	□□□□□ -0.3
MATR3-238	ENST00000512107	DNAJC13	O75165	2243 aa		13.15	□□□□□ -0.31
MATR3-238	ENST00000512107	TRGV5	A0A0B4J1U4	118 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107		A0A1B0GWA3	101 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	ERICH4	A6NGS2	130 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	CPSF4L	A6NMK7	179 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107		B8ZZF3	427 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	ACOT7	O00154	380 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	DIRAS1	O95057	198 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	NUDT14	O95848	222 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	CRYAB	P02511	175 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	MT-ND1	P03886	318 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	C8B	P07358	591 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	SUCLG1	P53597	346 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	RGS8	P57771	180 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	LSM11	P83369	360 aa	Known RBP eCLIP	13.14	□□□□□ -0.31	1e-6	■□□□□ 10.9
MATR3-238	ENST00000512107	VLDLR	P98155	873 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	CRYZ	Q08257	329 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	MRPL49	Q13405	166 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	ELOA	Q14241	798 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	OR1Q1	Q15612	314 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	EMC4	Q5J8M3	183 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	YTHDF3	Q7Z739	585 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	DHFR2	Q86XF0	187 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	ADGRG3	Q86Y34	549 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	ADGRG5	Q8IZF4	528 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	CADM2	Q8N3J6	435 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	TOR1AIP2	Q8NFQ8	470 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	OR52E4	Q8NGH9	312 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	NEIL3	Q8TAT5	605 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	MIB2	Q96AX9	1013 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	SLCO4A1	Q96BD0	722 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	C3orf49	Q96BT1	292 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	NSMCE2	Q96MF7	247 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	MCHR1	Q99705	422 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	TMEM185B	Q9H7F4	350 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	QPCTL	Q9NXS2	382 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	OSGIN1	Q9UJX0	560 aa		13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	PRRC2C	Q9Y520	2896 aa	Known RBP	13.14	□□□□□ -0.31
MATR3-238	ENST00000512107	TMEM72	A0PK05	275 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	ZC3H12D	A2A288	527 aa	Known RBP	13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	FAAH	O00519	579 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	PRSS23	O95084	383 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	PGC	P20142	388 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	KLK2	P20151	261 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	CCNA2	P20248	432 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	TACR3	P29371	465 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	UQCRFS1	P47985	274 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	LHX2	P50458	406 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	CLDN20	P56880	219 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	TRAP1	Q12931	704 aa	Known RBP	13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	ENTPD8	Q5MY95	495 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	C1QL3	Q5VWW1	255 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	POMZP3	Q6PJE2	187 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	ZNF550	Q7Z398	422 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	ATG4D	Q86TL0	474 aa	Predicted RBP	13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	GGN	Q86UU5	652 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	TNIP2	Q8NFZ5	429 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	MCUR1	Q96AQ8	359 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	PYURF	Q96I23	114 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	RHCG	Q9UBD6	479 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	B4GALT7	Q9UBV7	327 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	A4GNT	Q9UNA3	340 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	SVIL	O95425	2214 aa		13.13	□□□□□ -0.31
MATR3-238	ENST00000512107	IGKV1D-42	A0A075B6H8	117 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107		A0A087WZY1	265 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	TCRBV3S1	A0A5B6	114 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	C7orf72	A4D263	438 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	hCG_2039718	K7EN88	272 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	PEPD	P12955	493 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	RASSF2	P50749	326 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	ZNF41	P51814	821 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	CDH12	P55289	794 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	CLDN18	P56856	261 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	TLE1	Q04724	770 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	MERTK	Q12866	999 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	FOXD4	Q12950	439 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	PIN1	Q13526	163 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	GANAB	Q14697	944 aa	Known RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	CTU2	Q2VPK5	515 aa	Known RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	IFI44L	Q53G44	452 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	RAET1L	Q5VY80	246 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	VASN	Q6EMK4	673 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	DEF8	Q6ZN54	512 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	P3H2	Q8IVL5	708 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	ZNF440	Q8IYI8	595 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	RPRML	Q8N4K4	120 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	ATP6V1C2	Q8NEY4	427 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	ZNF563	Q8TA94	476 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	WDYHV1	Q96HA8	205 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	SFXN2	Q96NB2	322 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	TIMP4	Q99727	224 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	PRSS27	Q9BQR3	290 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	OR11A1	Q9GZK7	315 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	PTGES2	Q9H7Z7	377 aa		13.12	□□□□□ -0.31
MATR3-238	ENST00000512107	MAN2C1	Q9NTJ4	1040 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms