RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 NTRK2Q16620 822 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 BTBD16Q32M84 506 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 C6orf52Q5T4I8 152 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 RPL13AP3Q6NVV1 102 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 H3F3CQ6NXT2 135 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 PGBD2Q6P3X8 592 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 FDX2Q6P4F2 183 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 PODNL1Q6PEZ8 512 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 C5orf46Q6UWT4 87 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 MBOAT2Q6ZWT7 520 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 RRM2BQ7LG56 351 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 OLIG3Q7RTU3 272 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 ASCL5Q7RTU5 278 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 PPP1R32Q7Z5V6 425 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 RBM45Q8IUH3 476 aaKnown RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 C8orf59Q8N0T1 100 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 SLC5A8Q8N695 610 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 POGLUT1Q8NBL1 392 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 PIGXQ8TBF5 258 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 FBLIM1Q8WUP2 373 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 CYGBQ8WWM9 190 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 CNOT9Q92600 299 aaKnown RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 KIAA1143Q96AT1 154 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 EFHD2Q96C19 240 aaPredicted RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 DTNBP1Q96EV8 351 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 ADOQ96SZ5 270 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 MBOAT4Q96T53 435 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 TBL1XR1Q9BZK7 514 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 UCK2Q9BZX2 261 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 SMURF2Q9HAU4 748 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 CPNE5Q9HCH3 593 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 BATF3Q9NR55 127 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 SDHAF3Q9NRP4 125 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 RLIMQ9NVW2 624 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 SELENONQ9NZV5 590 aa8.33□□□□□ -1.08
NR1I3-230ENST00000511944 NDRG4Q9ULP0 352 aaKnown RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 YARS2Q9Y2Z4 477 aaKnown RBP8.33□□□□□ -1.08
NR1I3-230ENST00000511944 A0A087WUU8 490 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 LOC100130705A0A1B0GUX0 176 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 SPAARA0A1B0GVQ0 90 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 TRIM64A6NGJ6 449 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 CPSF4LA6NMK7 179 aaKnown RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ETV2O00321 342 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 TP53I11O14683 189 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 BCKDKO14874 412 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 KLF4O43474 513 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 OR10H3O60404 316 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 CDC40O60508 579 aaKnown RBP eCLIP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ICOSLGO75144 302 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 BCAS1O75363 584 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 OR6B1O95007 311 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 LIPCP11150 499 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 OSMP13725 252 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 PGCP20142 388 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 PRKACGP22612 351 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 HTR3AP46098 478 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 YAP1P46937 504 aaKnown RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 GSSP48637 474 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 NOVA1P51513 510 aaKnown RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 CXCR4P61073 352 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 GABREP78334 506 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 NHLH1Q02575 133 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 C17orf67Q0P5P2 114 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 TSPAN31Q12999 210 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 TOP3AQ13472 1001 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ANKDD1AQ495B1 522 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 KCTD21Q4G0X4 260 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 WBP2NLQ6ICG8 309 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 UGT2A3Q6UWM9 527 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 RASSF6Q6ZTQ3 369 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 GDF7Q7Z4P5 450 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 THAP5Q7Z6K1 395 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 MRGPREQ86SM8 312 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 APLFQ8IW19 511 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 CDK20Q8IZL9 346 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 HS3ST5Q8IZT8 346 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF614Q8N883 585 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 AQP11Q8NBQ7 271 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 OR52J3Q8NH60 311 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 GNPDA2Q8TDQ7 276 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ADAMTS17Q8TE56 1095 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 HGDQ93099 445 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ZNF566Q969W8 418 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 SPACA9Q96E40 222 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 SGCZQ96LD1 299 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 BARD1Q99728 777 aaKnown RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 WFDC6Q9BQY6 131 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 TMEM43Q9BTV4 400 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 PRRG3Q9BZD7 231 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 ASCL3Q9NQ33 180 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 RPS6KB2Q9UBS0 482 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 BLOC1S6Q9UL45 172 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 SLC7A7Q9UM01 511 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 MAGED1Q9Y5V3 778 aaPredicted RBP8.32□□□□□ -1.08
NR1I3-230ENST00000511944 SEC16AO15027 2179 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
NR1I3-230ENST00000511944 NPIPA5A0A0B4J1W7 369 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 IGHV3-20A0A0C4DH32 117 aa8.31□□□□□ -1.08
NR1I3-230ENST00000511944 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms