RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 BHLHE41Q9C0J9 482 aaPredicted RBP16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 TNFRSF12AQ9NP84 129 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 TMEM216Q9P0N5 145 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 MOKQ9UQ07 419 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 FKBP7Q9Y680 259 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 KCNE3Q9Y6H6 103 aa16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 PRKDCP78527 4128 aaKnown RBP16.61■□□□□ 0.25
HMGCS1-206ENST00000511774 LILRA1O75019 489 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 ENO1P06733 434 aaKnown RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 ALOX5P09917 674 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 FRKP42685 505 aaPredicted RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 COMPP49747 757 aaPredicted RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 DIO1P49895 249 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 SUMO3P55854 103 aaPredicted RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 POU6F2P78424 691 aaPredicted RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 CAV1Q03135 178 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 QPRTQ15274 297 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 MTERF4Q7Z6M4 381 aaKnown RBP16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 ZNF527Q8NB42 609 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 DNAJA3Q96EY1 480 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 BTBD2Q9BX70 525 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 TAS2R16Q9NYV7 291 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 MALT1Q9UDY8 824 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 CCL27Q9Y4X3 112 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 CMYA5Q8N3K9 4069 aa16.6■□□□□ 0.25
HMGCS1-206ENST00000511774 TRIM49D1C9J1S8 452 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 NPIPB9F8W1W9 429 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 BMP4P12644 408 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 IMPDH1P20839 514 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 LCP2Q13094 533 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 KIAA0040Q15053 153 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 RINLQ6ZS11 566 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 IKBIPQ70UQ0 350 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 RFWD2Q8NHY2 731 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 JADE3Q92613 823 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 APH1AQ96BI3 265 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 PAFAH2Q99487 392 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 VRK1Q99986 396 aaPredicted RBP16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 GSTO2Q9H4Y5 243 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 FKRPQ9H9S5 495 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 SIRT3Q9NTG7 399 aaPredicted RBP16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 ZDHHC18Q9NUE0 388 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 ASB6Q9NWX5 421 aa16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 NOSIPQ9Y314 301 aaKnown RBP16.59■□□□□ 0.25
HMGCS1-206ENST00000511774 RGS9O75916 674 aaPredicted RBP16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 SERPINB4P48594 390 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 PKNOX1P55347 436 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 MLC1Q15049 377 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 TIGD2Q4W5G0 525 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 CDC73Q6P1J9 531 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 TMPPEQ6ZT21 453 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 SGMS2Q8NHU3 365 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 FAM76AQ8TAV0 307 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 DCAKDQ8WVC6 231 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 FAM120BQ96EK7 910 aaKnown RBP16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 OCEL1Q9H607 264 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 SLC17A5Q9NRA2 495 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 UTP11Q9Y3A2 253 aaKnown RBP16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 PTGDR2Q9Y5Y4 395 aa16.58■□□□□ 0.24
HMGCS1-206ENST00000511774 AKAP10O43572 662 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 STAMBPO95630 424 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 HMGN2P05204 90 aaKnown RBP16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 INHBAP08476 426 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 TACSTD2P09758 323 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 LASP1Q14847 261 aaKnown RBP16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 PDK3Q15120 406 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 C3orf33Q6P1S2 294 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 TRIM46Q7Z4K8 759 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 CCDC103Q8IW40 242 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 OR5W2Q8NH69 310 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 L3HYPDHQ96EM0 354 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 FUT8Q9BYC5 575 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 MID1IP1Q9NPA3 183 aa16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 WBP11Q9Y2W2 641 aaKnown RBP16.57■□□□□ 0.24
HMGCS1-206ENST00000511774 CENPVL1A0A0U1RR11 272 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 GTPBP1O00178 669 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 GIFP27352 417 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 APEX1P27695 318 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 PRKAA2P54646 552 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 CDH15P55291 814 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 TRIP10Q15642 601 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 IMPG1Q17R60 797 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 OR7E24Q6IFN5 339 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 SLC46A3Q7Z3Q1 461 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 MTDHQ86UE4 582 aaKnown RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 TMCO5AQ8N6Q1 288 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 C3orf56Q8N813 242 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 LINC01356Q8N9X3 169 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 CLHC1Q8NHS4 586 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 ZFAND2BQ8WV99 257 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 ZMYND19Q96E35 227 aaPredicted RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 ZNF764Q96H86 408 aaPredicted RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 SNX18Q96RF0 628 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 PIGUQ9H490 435 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 METTL17Q9H7H0 456 aaPredicted RBP16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 DUSP22Q9NRW4 184 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 SLC7A10Q9NS82 523 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 EMC3Q9P0I2 261 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 KCNE5Q9UJ90 142 aa16.56■□□□□ 0.24
HMGCS1-206ENST00000511774 METRNQ9UJH8 293 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms