RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	FAM192A	Q9GZU8	254 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	SCN3B	Q9NY72	215 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	CNIH4	Q9P003	139 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	PCDHGB1	Q9Y5G3	927 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	TEX51	A0A1B0GUA7	166 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756		A6NHS1	94 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	UNC119B	A6NIH7	251 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	HCN1	O60741	890 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	FUT4	P22083	530 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	RPL5	P46777	297 aa	Known RBP	11.19	□□□□□ -0.62
CAST-233	ENST00000510756	GIPR	P48546	466 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	SSR4	P51571	173 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	SOX8	P57073	446 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	GABRE	P78334	506 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	EFNB1	P98172	346 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	IL5RA	Q01344	420 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	IL1RL1	Q01638	556 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	SLC27A4	Q6P1M0	643 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	ZNF773	Q6PK81	442 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	ENTHD1	Q8IYW4	607 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	FAM26E	Q8N5C1	309 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	STK35	Q8TDR2	534 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	GRHL3	Q8TE85	626 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	DUSP21	Q9H596	190 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	IMPAD1	Q9NX62	359 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756	DNAH14	Q0VDD8	3507 aa		11.19	□□□□□ -0.62
CAST-233	ENST00000510756		A0A087WZY1	265 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	SPAAR	A0A1B0GVQ0	90 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	SLC1A7	O00341	560 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	ADAM11	O75078	769 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	JUNB	P17275	347 aa	Predicted RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	TTK	P33981	857 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	GRK5	P34947	590 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	HOXC5	Q00444	222 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CASP12	Q6UXS9	341 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	WDR88	Q6ZMY6	472 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	GRINA	Q7Z429	371 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	RPS19BP1	Q86WX3	136 aa	Known RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CCDC71	Q8IV32	467 aa	Predicted RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PRR22	Q8IZ63	422 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	GPR119	Q8TDV5	335 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	NKD1	Q969G9	470 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	BPIFA2	Q96DR5	249 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FER1L6-AS2	Q96M78	137 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	SLC38A2	Q96QD8	506 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	ASCL3	Q9NQ33	180 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CNOT2	Q9NZN8	540 aa	Known RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FBXL4	Q9UKA2	621 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	RNF6	Q9Y252	685 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CARD8	Q9Y2G2	431 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	NTNG1	Q9Y2I2	539 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	IRGM	A1A4Y4	181 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	WWP2	O00308	870 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	HCRTR2	O43614	444 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PTP4A3	O75365	173 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	OR2J2	O76002	312 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CLPTM1	O96005	669 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PIP	P12273	146 aa	Predicted RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	GP1BB	P13224	206 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	POLR2H	P52434	150 aa	Known RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	TMED1	Q13445	227 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	CTU2	Q2VPK5	515 aa	Known RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	MARCH3	Q86UD3	253 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FAM81A	Q8TBF8	368 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PAQR8	Q8TEZ7	354 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	SGTB	Q96EQ0	304 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FAM46A	Q96IP4	442 aa	Known RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	NODAL	Q96S42	347 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	TUBA1C	Q9BQE3	449 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PRR14	Q9BWN1	585 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FN3K	Q9H479	309 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.18	□□□□□ -0.62
CAST-233	ENST00000510756	FKBP14	Q9NWM8	211 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	P4HTM	Q9NXG6	502 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	PCDHGB5	Q9Y5G0	923 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	WIF1	Q9Y5W5	379 aa		11.18	□□□□□ -0.62
CAST-233	ENST00000510756	SMIM31	A0A1B0GVY4	71 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	CDC14C	A4D256	554 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	PMS2P1	A4D2B8	440 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.17	□□□□□ -0.62
CAST-233	ENST00000510756	SNTN	A6NMZ2	147 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	EFCAB9	A8MZ26	197 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ITGA10	O75578	1167 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	CLIC3	O95833	236 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	MT-ATP6	P00846	226 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	TSPAN19	P0C672	248 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	LIPC	P11150	499 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	IFI30	P13284	250 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ADH6	P28332	368 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	EPHA2	P29317	976 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	IDH2	P48735	452 aa	Known RBP	11.17	□□□□□ -0.62
CAST-233	ENST00000510756	MVK	Q03426	396 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	MEP1A	Q16819	746 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ELOA3B	Q3SY89	546 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	LAIR2	Q6ISS4	152 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	BORA	Q6PGQ7	559 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	FADS6	Q8N9I5	356 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ELOA3	Q8NG57	546 aa		11.17	□□□□□ -0.62
CAST-233	ENST00000510756	ASB15	Q8WXK1	588 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms