RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 SERPINA2P20848 420 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 AHCYP23526 432 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 HRH2P25021 359 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MPSTP25325 297 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CD82P27701 267 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PRDX5P30044 214 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GABRA5P31644 462 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ACAA2P42765 397 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 HCAR3P49019 387 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MAN2A2P49641 1150 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CLK2P49760 499 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 BLKP51451 505 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 KCNQ1P51787 676 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CLCN3P51790 818 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SUB1P53999 127 aaKnown RBP eCLIP3.37□□□□□ -1.87
USP53-205ENST00000509769 ADPRHP54922 357 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CLDN20P56880 219 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR12D2P58182 307 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GRB2P62993 217 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CACNG1Q06432 222 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PMS2P3Q13401 168 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 GPM6BQ13491 265 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 VEZF1Q14119 521 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ELOBQ15370 118 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 EML3Q32P44 896 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 FLYWCH1Q4VC44 716 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF8Q5VWM4 474 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PRAMEF7Q5VXH5 474 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TMEM236Q5W0B7 351 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SPRYD7Q5W111 196 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NOTUMQ6P988 496 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 DPPA3Q6W0C5 159 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 Q6ZTK2 550 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CEACAM19Q7Z692 300 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 WDR5BQ86VZ2 330 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TMEM173Q86WV6 379 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 LYSMD2Q8IV50 215 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 YAF2Q8IY57 180 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 FAM71AQ8IYT1 594 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 LINC00518Q8N0U6 118 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF680Q8NEM1 530 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR1S2Q8NGQ3 325 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR2G3Q8NGZ4 309 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR4L1Q8NH43 312 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR52N1Q8NH53 320 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR1S1Q8NH92 325 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 OR5K2Q8NHB8 316 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PXYLP1Q8TE99 480 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SFT2D1Q8WV19 159 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 THAP4Q8WY91 577 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 RERGQ96A58 199 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 ACY3Q96HD9 319 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 AHCYL2Q96HN2 611 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 ZNF514Q96K75 400 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CNN2Q99439 309 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 MAP3K3Q99759 626 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 NICN1Q9BSH3 213 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 PSMG3Q9BT73 122 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CABLES2Q9BTV7 478 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 TTYH3Q9C0H2 523 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 LHPPQ9H008 270 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 POPDC2Q9HBU9 364 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MS4A12Q9NXJ0 267 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SIRPGQ9P1W8 387 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 CA14Q9ULX7 337 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 SLC6A14Q9UN76 642 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 KCNK6Q9Y257 313 aa3.37□□□□□ -1.87
USP53-205ENST00000509769 MRPS16Q9Y3D3 137 aaKnown RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 SOX21Q9Y651 276 aaPredicted RBP3.37□□□□□ -1.87
USP53-205ENST00000509769 CNTNAP5Q8WYK1 1306 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 HELTA6NFD8 242 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 DBX1A6NMT0 343 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 LEFTY2O00292 366 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OR10H2O60403 315 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF623O75123 536 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 NUDT14O95848 222 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 OAS1P00973 400 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 POMCP01189 267 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ALPLP05186 524 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 HOXA13P31271 388 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 CD80P33681 288 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PTGER3P43115 390 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 RNF144AP50876 292 aaPredicted RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 MTCP1P56278 107 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 HSD17B7P56937 341 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FXYD6P3P58550 94 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 SNRPD2P62316 118 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF92Q03936 586 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 PPP1R8Q12972 351 aaKnown RBP3.36□□□□□ -1.87
USP53-205ENST00000509769 SNAPC2Q13487 334 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ZNF124Q15973 351 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 DECR1Q16698 335 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FAM174BQ3ZCQ3 159 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CDONQ4KMG0 1287 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 CT83Q5H943 113 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 FAM209BQ5JX69 171 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ATAT1Q5SQI0 421 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 ENPP6Q6UWR7 440 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 MPZL3Q6UWV2 235 aa3.36□□□□□ -1.87
USP53-205ENST00000509769 DHRS13Q6UX07 377 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms