RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 COLEC12Q5KU26 742 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 RIPPLY2Q5TAB7 128 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ULK3Q6PHR2 472 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 XKRXQ6PP77 449 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CHMP1BQ7LBR1 199 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ZAR1Q86SH2 424 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ADGRE4PQ86SQ3 457 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CLEC4FQ8N1N0 589 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF614Q8N883 585 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ASB5Q8WWX0 329 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 GEMIN6Q8WXD5 167 aaKnown RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 WNT2BQ93097 391 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CPNE4Q96A23 557 aaPredicted RBP7.66□□□□□ -1.18
PDGFC-205ENST00000506880 DDIT4LQ96D03 193 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ASB9Q96DX5 294 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 HS6ST2Q96MM7 605 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 EPYCQ99645 322 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 BTBD10Q9BSF8 475 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 MAGIXQ9H6Y5 334 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 EXO5Q9H790 373 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 RNF122Q9H9V4 155 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM27Q9HBJ8 222 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 FANCFQ9NPI8 374 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 FBXO34Q9NWN3 711 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CMTM6Q9NX76 183 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CHRNA9Q9UGM1 479 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 KCNE5Q9UJ90 142 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 FBXL2Q9UKC9 423 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 ACAD8Q9UKU7 415 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 SLC5A6Q9Y289 635 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 CARD8Q9Y2G2 431 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 NTNG1Q9Y2I2 539 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 SNX13Q9Y5W8 968 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 MED12LQ86YW9 2145 aa7.66□□□□□ -1.18
PDGFC-205ENST00000506880 OR2M5A3KFT3 312 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CLEC18AA5D8T8 446 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 HSPB2A8KAH6 182 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 FAM166BA8MTA8 275 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CXCR6O00574 342 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 AP3D1O14617 1153 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 GYG2O15488 501 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 VAMP5O95183 116 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 WISP1O95388 367 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 PMS2P2O95744 297 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 NUDT14O95848 222 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 FESP07332 822 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RFPL3SP0C7P2 107 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 UBTFL6P0CB48 400 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 PLA2G2AP14555 144 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 BMP7P18075 431 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 POU3F2P20265 443 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 PAX7P23759 505 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ACVR2AP27037 513 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RBM34P42696 430 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ACAA2P42765 397 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 GSK3BP49841 420 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 LHX2P50458 406 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 SMSP52788 366 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 MLLT10P55197 1068 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RGS8P57771 180 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 SESN3P58005 492 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 B3GALT5-AS1P59052 145 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RAC3P60763 192 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 GABPB1Q06547 395 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CACNA1CQ13936 2221 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TRIM25Q14258 630 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 PDK3Q15120 406 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 QPRTQ15274 297 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RNPS1Q15287 305 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TOMM20Q15388 145 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 HSPB2Q16082 182 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RAET1LQ5VY80 246 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 NSUN5P2Q63ZY6 315 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 BICRALQ6AI39 1079 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 LCN8Q6JVE9 175 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CLEC18BQ6UXF7 455 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF836Q6ZNA1 936 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CBLL1Q75N03 491 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CYP4Z1Q86W10 505 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CHERPQ8IWX8 916 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 DEFB107AQ8IZN7 70 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF808Q8N4W9 903 aaPredicted RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 LINC00471Q8N535 108 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TMCO5AQ8N6Q1 288 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CLEC18CQ8NCF0 446 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 RBM15BQ8NDT2 890 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ZNF563Q8TA94 476 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 SLC38A4Q969I6 547 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 MAL2Q969L2 176 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ZHX1-C8orf76Q96EF9 292 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 SLC47A1Q96FL8 570 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 LRRC46Q96FV0 321 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 CDRT15Q96T59 188 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TIMP4Q99727 224 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 ARHGDIGQ99819 225 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 USB1Q9BQ65 265 aaKnown RBP7.65□□□□□ -1.18
PDGFC-205ENST00000506880 TMEM43Q9BTV4 400 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 UGT2B28Q9BY64 529 aa7.65□□□□□ -1.18
PDGFC-205ENST00000506880 YY1AP1Q9H869 796 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms