RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 LRRC28Q86X40 367 aaPredicted RBP7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 CADM2Q8N3J6 435 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 ARL14Q8N4G2 192 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR5J2Q8NH18 312 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 SMPDL3BQ92485 455 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 FAM3CQ92520 227 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 CNOT9Q92600 299 aaKnown RBP7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 GHSRQ92847 366 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 RFT1Q96AA3 541 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 MYADMQ96S97 322 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 ABHD1Q96SE0 405 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 TMEM27Q9HBJ8 222 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 ADGRL4Q9HBW9 690 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 DUSP22Q9NRW4 184 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACTR10Q9NZ32 417 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZMIZ1Q9ULJ6 1067 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 MRPS7Q9Y2R9 242 aaKnown RBP7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 SPEGQ15772 3267 aa7.05□□□□□ -1.28
PPARGC1A-204ENST00000506055 TRAV6A0A075B6T7 132 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 A0A1W2PQF6 199 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC9B1P1A6NJY1 282 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ARHGEF9O43307 516 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PLPP2O43688 288 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC43A1O75387 559 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 LYPD3O95274 346 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GPR75O95800 540 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ATP1B1P05026 303 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ATXN8OSP0DMR3 200 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 HOXB2P14652 356 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZNF3P17036 446 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 COL9A1P20849 921 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 RPS4Y1P22090 263 aaKnown RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 THBS2P35442 1172 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ATP12AP54707 1039 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 POU6F2P78424 691 aaPredicted RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 MRPL28Q13084 256 aaKnown RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SRSF5Q13243 272 aaKnown RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PRICKLE4Q2TBC4 344 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACSM3Q53FZ2 586 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 BCL2L15Q5TBC7 163 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GARNL3Q5VVW2 1013 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SSX6Q7RTT6 188 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SFTPA2Q8IWL1 248 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GPALPP1Q8IXQ4 340 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC44A3Q8N4M1 653 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 RFLNBQ8N5W9 214 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TRMT10AQ8TBZ6 339 aaKnown RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 DEDD2Q8WXF8 326 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 CREB3L1Q96BA8 519 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PHF21AQ96BD5 680 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SIPA1Q96FS4 1042 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PEX11GQ96HA9 241 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 BMFQ96LC9 184 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 WDR92Q96MX6 357 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZFYVE21Q9BQ24 234 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ERVMER34-1Q9H9K5 563 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ACOXLQ9NUZ1 547 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC35A3Q9Y2D2 325 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SPACA6W5XKT8 324 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 A0A0A6YYJ9 748 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 A0A0B4J203 849 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 CYR61O00622 381 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 LINC01565O15544 149 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TNFSF14O43557 240 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 BRINP1O60477 761 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ADAM11O75078 769 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 FZD7O75084 574 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PTP4A3O75365 173 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 KLF8O95600 359 aaPredicted RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 HK1P19367 917 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLC6A1P30531 599 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TNFRSF4P43489 277 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 LSSP48449 732 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GZMKP49863 264 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 VSX2P58304 361 aaPredicted RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GALK2Q01415 458 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TFF2Q03403 129 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZNF85Q03923 595 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 NFATC4Q14934 902 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 BTBD16Q32M84 506 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TP53I3Q53FA7 332 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 TIGD3Q6B0B8 471 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 FAAH2Q6GMR7 532 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 RPL13AP3Q6NVV1 102 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 DGAT2L6Q6ZPD8 337 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 RTL4Q6ZR62 310 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZNF761Q86XN6 746 aaPredicted RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 C7orf61Q8IZ16 206 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR4N2Q8NGD1 307 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR52E2Q8NGJ4 325 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 OR4K13Q8NH42 304 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 GRPEL2Q8TAA5 225 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZFAND1Q8TCF1 268 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 AKAP1Q92667 903 aaKnown RBP eCLIP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZMYND19Q96E35 227 aaPredicted RBP7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 ZFP3Q96NJ6 502 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 SLX1AQ9BQ83 275 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 RBCK1Q9BYM8 510 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 FLRT3Q9NZU0 649 aa7.04□□□□□ -1.28
PPARGC1A-204ENST00000506055 PILRAQ9UKJ1 303 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms