RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 PFDN5Q99471 154 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 SOX7Q9BT81 388 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 SEMA4CQ9C0C4 833 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 ALX4Q9H161 411 aaPredicted RBP4.81□□□□□ -1.64
CLDND1-208ENST00000503004 OR51I1Q9H343 314 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 ANKRD19PQ9H560 264 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 SMURF1Q9HCE7 757 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 CHMP1AQ9HD42 196 aaPredicted RBP4.81□□□□□ -1.64
CLDND1-208ENST00000503004 LYARQ9NX58 379 aaKnown RBP4.81□□□□□ -1.64
CLDND1-208ENST00000503004 EPHA6Q9UF33 1036 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 KIF25Q9UIL4 384 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 ADAM30Q9UKF2 790 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 MUC3AQ02505 3323 aa4.81□□□□□ -1.64
CLDND1-208ENST00000503004 TLR4O00206 839 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CDC123O75794 336 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 EPPINO95925 133 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 HMGN2P05204 90 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 H1F0P07305 194 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ADRB1P08588 477 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FGF2P09038 288 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SPP1P10451 314 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 NR2F1P10589 423 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CBR1P16152 277 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 PTNP21246 168 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 GALNSP34059 522 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 BCL6P41182 706 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 MAN2A2P49641 1150 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 REEP5Q00765 189 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ARHGAP19Q14CB8 494 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SNAPC1Q16533 368 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TEX30Q5JUR7 227 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C18orf63Q68DL7 685 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 OR4C11Q6IEV9 310 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ZFP82Q8N141 532 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 GHDCQ8N2G8 530 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TCEANCQ8N8B7 351 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM145Q8NBT3 493 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 OR6T1Q8NGN1 323 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CREB3L4Q8TEY5 395 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RGMAQ96B86 450 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CNRIP1Q96F85 164 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C16orf58Q96GQ5 468 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 DIRAS2Q96HU8 199 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C14orf144Q96I85 54 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ZNF354BQ96LW1 612 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SLC6A18Q96N87 628 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 AMDHD1Q96NU7 426 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 GPA33Q99795 319 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RPP25Q9BUL9 199 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 HDAC8Q9BY41 377 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 BARHL1Q9BZE3 327 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 PLA2G2FQ9BZM2 168 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 POLR2J3Q9H1A7 115 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 IGFLR1Q9H665 355 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 A4GALTQ9NPC4 353 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C14orf105Q9NVL8 296 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TVP23BQ9NYZ1 205 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 THAP10Q9P2Z0 257 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FBXW2Q9UKT8 454 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ATG4BQ9Y4P1 393 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 KCNE3Q9Y6H6 103 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SESN1Q9Y6P5 492 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C2orf16Q68DN1 1984 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 COL4A3Q01955 1670 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 DSPPQ9NZW4 1301 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 DMDP11532 3685 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 DOCK8Q8NF50 2099 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FAM240BA0A1B0GVZ2 78 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FABP12A6NFH5 140 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 LRRTM2O43300 516 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TLX2O43763 284 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ADAP00813 363 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RPN2P04844 631 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 S100A9P06702 114 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CHRM4P08173 479 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 NR2C1P13056 603 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 OSMP13725 252 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RAB3BP20337 219 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FCARP24071 287 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 CERS1P27544 350 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RFC3P40938 356 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 BUD31P41223 144 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FRKP42685 505 aaPredicted RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RAB28P51157 221 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 PSMD4P55036 377 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FUT5Q11128 374 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 RUNX3Q13761 415 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SNTB1Q13884 538 aaKnown RBP4.8□□□□□ -1.64
CLDND1-208ENST00000503004 COTL1Q14019 142 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 KRT33BQ14525 404 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 FCN2Q15485 313 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 SSX1Q16384 188 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 PLAG1Q6DJT9 500 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 KIAA1211LQ6NV74 962 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 C3orf33Q6P1S2 294 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 PGBD2Q6P3X8 592 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 ARHGAP11AQ6P4F7 1023 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 TMEM107Q6UX40 140 aa4.8□□□□□ -1.64
CLDND1-208ENST00000503004 NLRC3Q7RTR2 1065 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms