RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 LRR1Q96L50 414 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 LPAR4Q99677 370 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 FUNDC2Q9BWH2 189 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 LAT2Q9GZY6 243 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 NAA50Q9GZZ1 169 aaKnown RBP20.18■□□□□ 0.82
PTPN13-205ENST00000502971 OTOGLQ3ZCN5 2332 aa20.18■□□□□ 0.82
PTPN13-205ENST00000502971 A0A087WUJ7 227 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 TRIM64BA6NI03 449 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 EFCAB9A8MZ26 197 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 PROB1E7EW31 1015 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 ZNF28P17035 718 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 NRG3P56975 720 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 NCF4Q15080 339 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 ANKRD13BQ86YJ7 626 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 OR52L1Q8NGH7 329 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 FANK1Q8TC84 345 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 SAMD8Q96LT4 415 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 ZNF582Q96NG8 517 aaPredicted RBP20.17■□□□□ 0.82
PTPN13-205ENST00000502971 OR52D1Q9H346 318 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 FAM86C1Q9NVL1 165 aa20.17■□□□□ 0.82
PTPN13-205ENST00000502971 ALG1L2C9J202 215 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SURF4O15260 269 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 AHCYL1O43865 530 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 GDF9O60383 454 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 DBTP11182 482 aaKnown RBP20.16■□□□□ 0.82
PTPN13-205ENST00000502971 BMP7P18075 431 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 PSMB9P28065 219 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 PCSK6P29122 969 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SLC6A8P48029 635 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SLC30A6Q6NXT4 461 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SLC43A2Q8N370 569 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 OR8K3Q8NH51 312 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 C3orf49Q96BT1 292 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 CMKLR1Q99788 373 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 WDR77Q9BQA1 342 aaPredicted RBP20.16■□□□□ 0.82
PTPN13-205ENST00000502971 BCL7BQ9BQE9 202 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SLC39A1Q9NY26 324 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 ICAM5Q9UMF0 924 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 CARD8Q9Y2G2 431 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 OR6C70A6NIJ9 312 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 HCN1O60741 890 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 RFPL3O75679 317 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SAGP10523 405 aaPredicted RBP20.16■□□□□ 0.82
PTPN13-205ENST00000502971 ZNF91Q05481 1191 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 TMEM44Q2T9K0 475 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 YIPF6Q96EC8 236 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 PLEKHA8Q96JA3 519 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SLC19A3Q9BZV2 496 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 UBQLN3Q9H347 655 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 GPN2Q9H9Y4 310 aaPredicted RBP20.16■□□□□ 0.82
PTPN13-205ENST00000502971 ENPP5Q9UJA9 477 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 SIGLEC7Q9Y286 467 aa20.16■□□□□ 0.82
PTPN13-205ENST00000502971 WDR87Q6ZQQ6 2873 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 HTR3EA5X5Y0 456 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 KDM4EB2RXH2 506 aaPredicted RBP20.15■□□□□ 0.82
PTPN13-205ENST00000502971 MAN1A2O60476 641 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 EIF4E2O60573 245 aaKnown RBP20.15■□□□□ 0.82
PTPN13-205ENST00000502971 PTP4A3O75365 173 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 LCKP06239 509 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 PNMTP11086 282 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 CD59P13987 128 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 GRK5P34947 590 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 BCDIN3DQ7Z5W3 292 aaKnown RBP20.15■□□□□ 0.82
PTPN13-205ENST00000502971 GALNT15Q8N3T1 639 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 OR5L2Q8NGL0 311 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 TMEM80Q96HE8 168 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 LIN28AQ9H9Z2 209 aaKnown RBP20.15■□□□□ 0.82
PTPN13-205ENST00000502971 HHATLQ9HCP6 504 aa20.15■□□□□ 0.82
PTPN13-205ENST00000502971 IRGMA1A4Y4 181 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 PRODHO43272 600 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 OIP5O43482 229 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 PPM1BO75688 479 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 ATE1O95260 518 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 CCNA2P20248 432 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 TGM1P22735 817 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 FXYD6P3P58550 94 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 CRYZQ08257 329 aaKnown RBP20.14■□□□□ 0.81
PTPN13-205ENST00000502971 EFR3AQ14156 821 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 RNLSQ5VYX0 342 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 SMARCD3Q6STE5 483 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 CBLN3Q6UW01 205 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 TMCO5AQ8N6Q1 288 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 ANKK1Q8NFD2 765 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 OR13C2Q8NGS9 318 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 MR1Q95460 341 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 TBL1XR1Q9BZK7 514 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 ULBP3Q9BZM4 244 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 AKIRIN1Q9H9L7 192 aaPredicted RBP20.14■□□□□ 0.81
PTPN13-205ENST00000502971 PARD6AQ9NPB6 346 aa20.14■□□□□ 0.81
PTPN13-205ENST00000502971 MRPS18AQ9NVS2 196 aaKnown RBP20.14■□□□□ 0.81
PTPN13-205ENST00000502971 ENO4A6NNW6 628 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 C9J4A7 227 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 NDUFB5O43674 189 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 ADORA3P0DMS8 318 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 FUT1P19526 365 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 PEX19P40855 299 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 CCR4P51679 360 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 DESI1Q6ICB0 168 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 NAXDQ8IW45 347 aa20.13■□□□□ 0.81
PTPN13-205ENST00000502971 SGTBQ96EQ0 304 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms