RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 ZNF852Q6ZMS4 543 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 GHSRQ92847 366 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 CPEB1Q9BZB8 566 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 CXorf36Q9H7Y0 433 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 HHATLQ9HCP6 504 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 GAPDHSO14556 408 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ERCC1P07992 297 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 MMP11P24347 488 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 MC3RP41968 323 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 GPLD1P80108 840 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 PTPRRQ15256 657 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 LEG1Q6P5S2 330 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 SLCO4C1Q6ZQN7 724 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 CHST14Q8NCH0 376 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ISG20Q96AZ6 181 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ZBTB8AQ96BR9 441 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ARPC5LQ9BPX5 153 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 DNTTIP1Q9H147 329 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ACOXLQ9NUZ1 547 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 SLC35A3Q9Y2D2 325 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 HCKP08631 526 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 GIPP09681 153 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 TPBGQ13641 420 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF169Q14929 603 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 TEAD2Q15562 447 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 FIGNL1Q6PIW4 674 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 PAQR6Q6TCH4 344 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 KANSL1Q7Z3B3 1105 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 CLEC4EQ9ULY5 219 aa16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 YARS2Q9Y2Z4 477 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF208O43345 1280 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TNFP01375 233 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 HOXC5Q00444 222 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF616Q08AN1 781 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 LGALS14Q8TCE9 139 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ARL5BQ96KC2 179 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 CDC6Q99741 560 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 NRIP3Q9NQ35 241 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 EPHA6Q9UF33 1036 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TOR1AO14656 332 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 SRPX2O60687 465 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 C1orf105O95561 183 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TSPAN15O95858 294 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ATP1B1P05026 303 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 GABRB1P18505 474 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 CCKBRP32239 447 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 SGSHP51688 502 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF322Q6U7Q0 402 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ZBTB44Q8NCP5 570 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 PAQR8Q8TEZ7 354 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 SEMA4GQ9NTN9 838 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 COPS7AQ9UBW8 275 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TAS2R19P59542 299 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 CLLU1Q5K131 121 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 C18orf63Q68DL7 685 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 RPS10P5Q9NQ39 176 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 KIF25Q9UIL4 384 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 WNT6Q9Y6F9 365 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 B3GALT4O96024 378 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 PSMB10P40306 273 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 SRP9P49458 86 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 RIDAP52758 137 aaKnown RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TAS2R31P59538 309 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 MEF2DQ14814 521 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 GKN2Q86XP6 184 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 KLHDC7BQ96G42 594 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 LMF1Q96S06 567 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 ZNF587Q96SQ5 575 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 PRRT1Q99946 306 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 KLF16Q9BXK1 252 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 MVB12BQ9H7P6 319 aa16.1■□□□□ 0.17
HMGXB3-201ENST00000502717 TMEM150CB9EJG8 249 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 NPIPA5E9PKD4 350 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 DSCR3O14972 297 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SULT1B1O43704 296 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 IMPA1P29218 277 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 PFN3P60673 137 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 CTBSQ01459 385 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 VRK2Q86Y07 508 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 RNF113BQ8IZP6 322 aaKnown RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 STEAP2Q8NFT2 490 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 FBXL2Q9UKC9 423 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 NPIPA1Q9UND3 350 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 P2RX6O15547 441 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 CA3P07451 260 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SOX9P48436 509 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 RAB28P51157 221 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 DEFB134Q4QY38 66 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 TMUB2Q71RG4 321 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SPHK2Q9NRA0 654 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 IER3IP1Q9Y5U9 82 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 H7C417 338 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SGK494L7N484 410 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 SYT5O00445 386 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 AHSA1O95433 338 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 HOXC12P31275 282 aa16.09■□□□□ 0.17
HMGXB3-201ENST00000502717 CTSCP53634 463 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms