RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 IKBIPQ70UQ0 350 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 SPATA19Q7Z5L4 167 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 LINC01356Q8N9X3 169 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 GCDHQ92947 438 aaPredicted RBP10.22□□□□□ -0.77
CDK9-205ENST00000498339 ZHX1-C8orf76Q96EF9 292 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 SNX18Q96RF0 628 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 RAB17Q9H0T7 212 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 TAS2R7Q9NYW3 318 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 MOKQ9UQ07 419 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 AMDHD2Q9Y303 409 aa10.22□□□□□ -0.77
CDK9-205ENST00000498339 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 SULT2B1O00204 365 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 CYP7B1O75881 506 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 H6PDO95479 791 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 HSPA4LO95757 839 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 PCMT1P22061 227 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 MAGEA12P43365 314 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 DIO1P49895 249 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 CSNK2A1P68400 391 aaPredicted RBP10.21□□□□□ -0.77
CDK9-205ENST00000498339 LCP2Q13094 533 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 CBFBQ13951 182 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 QPRTQ15274 297 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 ABLIM2Q6H8Q1 611 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 CDC73Q6P1J9 531 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 SHQ1Q6PI26 577 aaKnown RBP10.21□□□□□ -0.77
CDK9-205ENST00000498339 VHLLQ6RSH7 139 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 CASP12Q6UXS9 341 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 OR52E4Q8NGH9 312 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 ZNF75CPQ92670 426 aaPredicted RBP10.21□□□□□ -0.77
CDK9-205ENST00000498339 HOXB13Q92826 284 aaPredicted RBP10.21□□□□□ -0.77
CDK9-205ENST00000498339 CDS1Q92903 461 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 PPCDCQ96CD2 204 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 DNAJA3Q96EY1 480 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 GIMAP5Q96F15 307 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 C16orf58Q96GQ5 468 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 QRSL1Q9H0R6 528 aaKnown RBP10.21□□□□□ -0.77
CDK9-205ENST00000498339 MID1IP1Q9NPA3 183 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 SERINC1Q9NRX5 453 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 UPB1Q9UBR1 384 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 ICAM5Q9UMF0 924 aa10.21□□□□□ -0.77
CDK9-205ENST00000498339 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.78
CDK9-205ENST00000498339 AKAP10O43572 662 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 MRPL33O75394 65 aaKnown RBP10.2□□□□□ -0.78
CDK9-205ENST00000498339 ERCC1P07992 297 aaPredicted RBP10.2□□□□□ -0.78
CDK9-205ENST00000498339 SBK3P0C264 359 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 TFPIP10646 304 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 IL2RGP31785 369 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 MAP3K8P41279 467 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 SERPINB9P50453 376 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 PKNOX1P55347 436 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 SCGB2A2Q13296 93 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 CCNIQ14094 377 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 LASP1Q14847 261 aaKnown RBP10.2□□□□□ -0.78
CDK9-205ENST00000498339 GABRA6Q16445 453 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 SWI5Q1ZZU3 235 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 TIGD2Q4W5G0 525 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 NOXRED1Q6NXP6 359 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 ZDHHC24Q6UX98 284 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 SEMA6DQ8NFY4 1073 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 GPR119Q8TDV5 335 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 ZFAND2BQ8WV99 257 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 EGLN2Q96KS0 407 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 PAFAH2Q99487 392 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 BTBD2Q9BX70 525 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 ACSS3Q9H6R3 686 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 ZCCHC3Q9NUD5 404 aaKnown RBP10.2□□□□□ -0.78
CDK9-205ENST00000498339 SIRT5Q9NXA8 310 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 SH3BP4Q9P0V3 963 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 WBP11Q9Y2W2 641 aaKnown RBP10.2□□□□□ -0.78
CDK9-205ENST00000498339 ACTL7BQ9Y614 415 aa10.2□□□□□ -0.78
CDK9-205ENST00000498339 A0A0A6YYJ9 748 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 TRIM49D1C9J1S8 452 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 POC1B-GALNT4F8VUJ3 575 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SLCO1B7G3V0H7 640 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 ZNF264O43296 627 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SLU7O95391 586 aaKnown RBP10.19□□□□□ -0.78
CDK9-205ENST00000498339 WNT11O96014 354 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 ITGA5P08648 1049 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 UBL4AP11441 157 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 CDH2P19022 906 aaPredicted RBP10.19□□□□□ -0.78
CDK9-205ENST00000498339 EFNA1P20827 205 aaPredicted RBP10.19□□□□□ -0.78
CDK9-205ENST00000498339 SERPINF1P36955 418 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 FOXG1P55316 489 aaPredicted RBP10.19□□□□□ -0.78
CDK9-205ENST00000498339 FOXA1P55317 472 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SLC25A3Q00325 362 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 TGFBR3Q03167 851 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 MERTKQ12866 999 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SYT14P1Q58G82 188 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 ZCCHC12Q6PEW1 402 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 C17orf78Q8N4C9 275 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SPATA4Q8NEY3 305 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 OR5W2Q8NH69 310 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 FAM76AQ8TAV0 307 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 ZNF418Q8TF45 676 aaPredicted RBP10.19□□□□□ -0.78
CDK9-205ENST00000498339 MUS81Q96NY9 551 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 HOXD1Q9GZZ0 328 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 RAB1BQ9H0U4 201 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 SLC17A5Q9NRA2 495 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 NINJ2Q9NZG7 142 aa10.19□□□□□ -0.78
CDK9-205ENST00000498339 MALT1Q9UDY8 824 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms