RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 KIAA1549Q9HCM3 1950 aa15.82■□□□□ 0.12
HDAC4-211ENST00000494800 MED12Q93074 2177 aa15.82■□□□□ 0.12
HDAC4-211ENST00000494800 PKDREJQ9NTG1 2253 aa15.82■□□□□ 0.12
HDAC4-211ENST00000494800 PRAMEF27A3QJZ7 478 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 CLIC1O00299 241 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 EDF1O60869 148 aaKnown RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 SS18L1O75177 396 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 C1QCP02747 245 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 NCF2P19878 526 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 PPIBP23284 216 aaKnown RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 FKBP2P26885 142 aaKnown RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 RYKP34925 604 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 APOBEC1P41238 236 aaKnown RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 SESN3P58005 492 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 FADDQ13158 208 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 RNPS1Q15287 305 aaKnown RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 ZSWIM7Q19AV6 140 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 AGKQ53H12 422 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 BTLAQ7Z6A9 289 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 OR6K3Q8NGY3 331 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 SLC25A43Q8WUT9 341 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-211ENST00000494800 ZG16BQ96DA0 208 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 ARMC7Q9H6L4 198 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 NPHS2Q9NP85 383 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 ACER3Q9NUN7 267 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 DCTN4Q9UJW0 460 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 PCDHB14Q9Y5E9 798 aa15.81■□□□□ 0.12
HDAC4-211ENST00000494800 DOCK7Q96N67 2140 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 GOSR1O95249 250 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 BCHEP06276 602 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 EPXP11678 715 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 NID1P14543 1247 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 HTR3AP46098 478 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 PCYT1AP49585 367 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 MVDP53602 400 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF239Q16600 458 aaKnown RBP15.8■□□□□ 0.12
HDAC4-211ENST00000494800 GTDC1Q4AE62 458 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 LIN52Q52LA3 116 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 GRINAQ7Z429 371 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 HMGN2P46Q86SG4 172 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 STK32CQ86UX6 486 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF440Q8IYI8 595 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 THOC1Q96FV9 657 aaKnown RBP15.8■□□□□ 0.12
HDAC4-211ENST00000494800 AURKBQ96GD4 344 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-211ENST00000494800 DACH2Q96NX9 599 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 PAIP1Q9H074 479 aaKnown RBP15.8■□□□□ 0.12
HDAC4-211ENST00000494800 EDARQ9UNE0 448 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 ZNF232Q9UNY5 417 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 CORO2BQ9UQ03 480 aa15.8■□□□□ 0.12
HDAC4-211ENST00000494800 INTS1Q8N201 2190 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 APCP25054 2843 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 A0A0G2JND7 137 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 A0A0G2JPF8 293 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 A6NNC1 897 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 HNRNPCL2B2RXH8 293 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 HNRNPCL3B7ZW38 293 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 C5orf58C9J3I9 102 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 CASKO14936 926 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 EFNA2O43921 213 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 HNRNPCL1O60812 293 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 TFPTP0C1Z6 253 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 HNRNPCL4P0DMR1 293 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 TROVE2P10155 538 aaKnown RBP eCLIP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 POU2F1P14859 743 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 RPS4Y1P22090 263 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 SHC1P29353 583 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 CD79BP40259 229 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 RAC3P60763 192 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 CSNK2A1P68400 391 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 LARS2Q15031 903 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 DAZAP2Q15038 168 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 GUSBP1Q15486 140 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 RGNQ15493 299 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 TMEM201Q5SNT2 666 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 PLEKHM3Q6ZWE6 761 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 CDH24Q86UP0 819 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 FUNDC1Q8IVP5 155 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 SLC43A2Q8N370 569 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 OR52P1PQ8NH57 321 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 LINC01560Q8TB33 94 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 SLC38A5Q8WUX1 472 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 OR5B2Q96R09 309 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 TACO1Q9BSH4 297 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 POLDIP3Q9BY77 421 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 OPN3Q9H1Y3 402 aaPredicted RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 GP6Q9HCN6 339 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 MRGBPQ9NV56 204 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 DNAJB12Q9NXW2 375 aaKnown RBP15.79■□□□□ 0.12
HDAC4-211ENST00000494800 PRDM4Q9UKN5 801 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 CLEC4AQ9UMR7 237 aa15.79■□□□□ 0.12
HDAC4-211ENST00000494800 A0A1W2PP18 115 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 SH3D21A4FU49 640 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CFAP73A6NFT4 308 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CLDN24A6NM45 220 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 EVPLLA8MZ36 301 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 CTAG2O75638 210 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 PRKD3O94806 890 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 TFPIP10646 304 aa15.78■□□□□ 0.12
HDAC4-211ENST00000494800 IDH2P48735 452 aaKnown RBP15.78■□□□□ 0.12
HDAC4-211ENST00000494800 KRTAP10-9P60411 292 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms