RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 CLDN24A6NM45 220 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 CLCA1A8K7I4 914 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 H0YC42 278 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 H3BNH8 94 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 C19orf84I3L1E1 186 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 FBP2O00757 339 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ZNF264O43296 627 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 EFNA2O43921 213 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 CSTAP01040 98 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 TFPTP0C1Z6 253 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 PRKCAP17252 672 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 IGFBP2P18065 325 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 GPX2P18283 190 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 LORP23490 312 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ELK4P28324 431 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 HTR1EP28566 365 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 GCKP35557 465 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ANXA11P50995 505 aaKnown RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ZNF41P51814 821 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ZNF136P52737 540 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ARFIP2P53365 341 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 TPD52P55327 224 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 CLDN20P56880 219 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 DSTNP60981 165 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 FOXF1Q12946 379 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 GPAT3Q53EU6 434 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 PLXDC2Q6UX71 529 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 METTL25Q8N6Q8 603 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ZNF614Q8N883 585 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 C9orf106Q8NAJ2 232 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 RELL2Q8NC24 303 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 OR5W2Q8NH69 310 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 SLC38A5Q8WUX1 472 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ASB5Q8WWX0 329 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 PMM1Q92871 262 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ZBTB8AQ96BR9 441 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ANAPC16Q96DE5 110 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 RNF145Q96MT1 663 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 TREX2Q9BQ50 279 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 TMPRSS13Q9BYE2 586 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 LAT2Q9GZY6 243 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 A4GALTQ9NPC4 353 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 SAR1AQ9NR31 198 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 ALKBH4Q9NXW9 302 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 COQ3Q9NZJ6 369 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 P2RX2Q9UBL9 471 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 LEF1Q9UJU2 399 aaPredicted RBP7.89□□□□□ -1.15
ITGB1-217ENST00000494395 SLC35A3Q9Y2D2 325 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 AP4B1Q9Y6B7 739 aa7.89□□□□□ -1.15
ITGB1-217ENST00000494395 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 FAM47E-STBD1D6RA91 191 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 PRSS44E7EML9 344 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 H0Y3Z8 333 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 H3BML4 177 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 FXYD1O00168 92 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 GTPBP1O00178 669 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 DYNC1I1O14576 645 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 BCHEP06276 602 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SNRPB2P08579 225 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 NR2F1P10589 423 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 POU3F2P20265 443 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 IL11P20809 199 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SHC1P29353 583 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CRATP43155 626 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 KCNJ10P78508 379 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SRYQ05066 204 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 KLF10Q13118 480 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SF3B4Q15427 424 aaKnown RBP eCLIP7.88□□□□□ -1.152e-6■■■■■ 34.4
ITGB1-217ENST00000494395 ADRM1Q16186 407 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 PRAMEF8Q5VWM4 474 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 PRAMEF7Q5VXH5 474 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 EIF3MQ7L2H7 374 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 HMGN2P46Q86SG4 172 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CMIPQ8IY22 773 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CA5BP1Q8WTZ4 195 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CNOT9Q92600 299 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 TMEM19Q96HH6 336 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 TRIB1Q96RU8 372 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 RAD21L1Q9H4I0 556 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 MTHFD2LQ9H903 347 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 EXOSC3Q9NQT5 275 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 THUMPD1Q9NXG2 353 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CHST2Q9Y4C5 530 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CORINQ9Y5Q5 1042 aa7.88□□□□□ -1.15
ITGB1-217ENST00000494395 SETXQ7Z333 2677 aaKnown RBP7.88□□□□□ -1.15
ITGB1-217ENST00000494395 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 MPDZO75970 2070 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 A0A0J9YW62 118 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 MEGF11A6BM72 1044 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 NKX2-6A6NCS4 301 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 HSPB2A8KAH6 182 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 ADAMDEC1O15204 470 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 RCBTB2O95199 551 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 ATE1O95260 518 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 TGM6O95932 706 aa7.87□□□□□ -1.15
ITGB1-217ENST00000494395 UBTFL6P0CB48 400 aaPredicted RBP7.87□□□□□ -1.15
ITGB1-217ENST00000494395 PPIBP23284 216 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms