RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 CORO2BQ9UQ03 480 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 CAPN7Q9Y6W3 813 aa9.37□□□□□ -0.91
TRAPPC12-222ENST00000493792 KIAA1549Q9HCM3 1950 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 A0A0G2JPF8 293 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 FAM221AA4D161 298 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 C7orf72A4D263 438 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MBD3L4A6NDZ8 208 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MBD3L3A6NE82 208 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MBD3L5A6NJ08 208 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 HNRNPCL2B2RXH8 293 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 HNRNPCL3B7ZW38 293 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MRASO14807 208 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CXCL13O43927 109 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 HNRNPCL1O60812 293 aaKnown RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SYNGR4O95473 234 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 HNRNPCL4P0DMR1 293 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 TFPIP10646 304 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 HOXB9P17482 250 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CCNA2P20248 432 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CTSSP25774 331 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC7A1P30825 629 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CEACAM8P31997 349 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 PGM1P36871 562 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC6A8P48029 635 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 ART1P52961 327 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SESN3P58005 492 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MTPNP58546 118 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 RAC1P63000 192 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SIRPAP78324 504 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 PON3Q15166 354 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CYP51A1Q16850 503 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC25A35Q3KQZ1 300 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 TMEM176BQ3YBM2 270 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 LIN52Q52LA3 116 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SPATA21Q7Z572 469 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 RETREG3Q86VR2 466 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SNX32Q86XE0 403 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CMIPQ8IY22 773 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CNEP1R1Q8N9A8 125 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 OR10D3Q8NH80 312 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 OR2V1Q8NHB1 315 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MBD3L2Q8NHZ7 208 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 BBS10Q8TAM1 723 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 C10orf82Q8WW14 230 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 FIG4Q92562 907 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 PMM1Q92871 262 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 LRRC46Q96FV0 321 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 MRGPRX4Q96LA9 322 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 KLHL15Q96M94 604 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CGREF1Q99674 301 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CPPED1Q9BRF8 314 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 ARMC7Q9H6L4 198 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 A4GALTQ9NPC4 353 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 SERINC1Q9NRX5 453 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 ARMCX1Q9P291 453 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 CLCF1Q9UBD9 225 aa9.36□□□□□ -0.91
TRAPPC12-222ENST00000493792 TRBV5-3A0A0A0MS03 114 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 A0A0J9YW62 118 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 CFAP73A6NFT4 308 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 GJE1A6NN92 205 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 CCDC22O60826 627 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 SMNDC1O75940 238 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 PGM3O95394 542 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 TGM6O95932 706 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 PLGP00747 810 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ARAFP10398 606 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 NID1P14543 1247 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 UQCRBP14927 111 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 SLC6A2P23975 617 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ELK4P28324 431 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ADH6P28332 368 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 SHC1P29353 583 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 AQP1P29972 269 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 UQCRC1P31930 480 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 LSP1P33241 339 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 OPRM1P35372 400 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 IDH2P48735 452 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF136P52737 540 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 CARD18P57730 90 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 CDK6Q00534 326 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 FOXF2Q12947 444 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 SELENBP1Q13228 472 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 CYLC2Q14093 348 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 SCARB2Q14108 478 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 MAPK11Q15759 364 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 RUNDC3AQ59EK9 446 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF311Q5JNZ3 666 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 REP15Q6BDI9 236 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 OR2A2Q6IF42 318 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 REEP3Q6NUK4 255 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 DLEU7Q6UYE1 221 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 MEX3BQ6ZN04 569 aaKnown RBP9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ZNF836Q6ZNA1 936 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 ESPNLQ6ZVH7 1005 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 GGNQ86UU5 652 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 KRT73Q86Y46 540 aa9.35□□□□□ -0.91
TRAPPC12-222ENST00000493792 DPP10Q8N608 796 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms