RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 FKBP6O75344 327 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 OR5F1O95221 314 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PRB1P04280 392 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 HPNP05981 417 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 GKN3PP0CG01 181 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PNMTP11086 282 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 FCGR1AP12314 374 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ZNF17P17021 662 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 RYKP34925 604 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 MAGEA2P43356 314 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 OR1E2P47887 323 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 IDH2P48735 452 aaKnown RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 RNF144AP50876 292 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 PLAURQ03405 335 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 SLC10A1Q14973 349 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 QPRTQ15274 297 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.29□□□□□ -0.6
SNX17-208ENST00000493711 NDUFAF6Q330K2 333 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PLEKHN1Q494U1 663 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 AAGABQ6PD74 315 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ULK3Q6PHR2 472 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 FAM180AQ6UWF9 173 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PLEKHM3Q6ZWE6 761 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 GRINAQ7Z429 371 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ZDHHC21Q8IVQ6 265 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 FAM86B1Q8N7N1 296 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 OR10Q1Q8NGQ4 319 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 CANT1Q8WVQ1 401 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 MPP4Q96JB8 637 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PRRC1Q96M27 445 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 PIGQQ9BRB3 760 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 RSPO3Q9BXY4 272 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 OR2B2Q9GZK3 357 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 UBQLN3Q9H347 655 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ANKRD19PQ9H560 264 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ZNF703Q9H7S9 590 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 ACKR4Q9NPB9 350 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 SERINC1Q9NRX5 453 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 MED17Q9NVC6 651 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 ARMC1Q9NVT9 282 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 FBXL2Q9UKC9 423 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 AP4S1Q9Y587 144 aa11.29□□□□□ -0.6
SNX17-208ENST00000493711 SPIN1Q9Y657 262 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 NUP214P35658 2090 aaPredicted RBP11.29□□□□□ -0.6
SNX17-208ENST00000493711 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 PINLYPA6NC86 204 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 H0YHG0 523 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 TFECO14948 347 aaPredicted RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 FRS3O43559 492 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 BCAS1O75363 584 aaPredicted RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 KRT36O76013 467 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 PRG2P13727 222 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 HK1P19367 917 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 ELK4P28324 431 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 POLR2HP52434 150 aaKnown RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 TAS2R41P59536 307 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 ALDH6A1Q02252 535 aaKnown RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 ST3GAL3Q11203 375 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 TOMM20Q15388 145 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 OR1Q1Q15612 314 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 NPTX1Q15818 432 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 PLPPR5Q32ZL2 321 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 ENTPD8Q5MY95 495 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 C5orf46Q6UWT4 87 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 COMTD1Q86VU5 262 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 GTPBP8Q8N3Z3 284 aaPredicted RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 OR14L1PQ8NHC6 308 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 PHF10Q8WUB8 498 aaKnown RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 ZNF300Q96RE9 604 aaPredicted RBP11.28□□□□□ -0.6
SNX17-208ENST00000493711 PIP5K1AQ99755 562 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 FNDC11Q9BVV2 318 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 CHID1Q9BWS9 393 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 AMBRA1Q9C0C7 1298 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 ADAM19Q9H013 955 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 ZDHHC11Q9H8X9 412 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 NDUFAF4Q9P032 175 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 V9GYQ6 96 aa11.28□□□□□ -0.6
SNX17-208ENST00000493711 NAV2Q8IVL1 2488 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 A0A0B4J2E0 115 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 A0A1B0GX12 115 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 ANKRD65E5RJM6 399 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 ADAMDEC1O15204 470 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
SNX17-208ENST00000493711 HCN1O60741 890 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 TRAPPC6AO75865 159 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 C1QL1O75973 258 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 PRKCAP17252 672 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 TNFRSF1BP20333 461 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 CHMP24386 653 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 CXCR1P25024 350 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 CLK1P49759 484 aaKnown RBP11.27□□□□□ -0.61
SNX17-208ENST00000493711 SESN3P58005 492 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 VLDLRP98155 873 aa11.27□□□□□ -0.61
SNX17-208ENST00000493711 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms