RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 EXOSC3Q9NQT5 275 aaKnown RBP10.47□□□□□ -0.73
CTSA-209ENST00000493522 SLC13A4Q9UKG4 626 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 ZNF232Q9UNY5 417 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 USP22Q9UPT9 525 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 AP3M1Q9Y2T2 418 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 IFT52Q9Y366 437 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 GPC6Q9Y625 555 aaPredicted RBP10.47□□□□□ -0.73
CTSA-209ENST00000493522 CACNA1CQ13936 2221 aa10.47□□□□□ -0.73
CTSA-209ENST00000493522 C7orf72A4D263 438 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 CDHR4A6H8M9 788 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 NME4O00746 187 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 AP3D1O14617 1153 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 WDR1O75083 606 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 SERPINB7O75635 380 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 OPN1SWP03999 348 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 LINGO3P0C6S8 592 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 PEPDP12955 493 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 UQCRBP14927 111 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 PRKCAP17252 672 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 ACVR2AP27037 513 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 EIF1P41567 113 aaKnown RBP10.46□□□□□ -0.73
CTSA-209ENST00000493522 SLC6A8P48029 635 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 STARP49675 285 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 GZMMP51124 257 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 EEF1A1P68104 462 aaKnown RBP10.46□□□□□ -0.73
CTSA-209ENST00000493522 LIPEQ05469 1076 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 KRT72Q14CN4 511 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 TOMM34Q15785 309 aaPredicted RBP10.46□□□□□ -0.73
CTSA-209ENST00000493522 GXYLT1Q4G148 440 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 EMC4Q5J8M3 183 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 C1orf185Q5T7R7 199 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 PATL1Q86TB9 770 aaKnown RBP10.46□□□□□ -0.73
CTSA-209ENST00000493522 ARMC8Q8IUR7 673 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 SLC15A3Q8IY34 581 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 ZNF440Q8IYI8 595 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 PM20D2Q8IYS1 436 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 ZNF295-AS1Q8N0V1 137 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 GTPBP8Q8N3Z3 284 aaPredicted RBP10.46□□□□□ -0.73
CTSA-209ENST00000493522 FBXO27Q8NI29 283 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 TMEM234Q8WY98 164 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 ST8SIA1Q92185 356 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 C14orf79Q96F83 325 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 TIMP4Q99727 224 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 NPAS1Q99742 590 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 PRDM14Q9GZV8 571 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 TMEM185BQ9H7F4 350 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 RLIMQ9NVW2 624 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 CMTM6Q9NX76 183 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 MEMO1Q9Y316 297 aa10.46□□□□□ -0.73
CTSA-209ENST00000493522 INTS1Q8N201 2190 aaKnown RBP10.46□□□□□ -0.74
CTSA-209ENST00000493522 PRORSD1PA6NEY8 169 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 CFAP73A6NFT4 308 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 LINC01387J3KSC0 135 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 FRS3O43559 492 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 GKN3PP0CG01 181 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ZNF708P17019 499 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ME2P23368 584 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ELK4P28324 431 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 PRKAR1BP31321 381 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 LHX2P50458 406 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 CLDN18P56856 261 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 PCBP3P57721 371 aaKnown RBP10.45□□□□□ -0.74
CTSA-209ENST00000493522 ZSWIM7Q19AV6 140 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 TMEM44Q2T9K0 475 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 C8orf82Q6P1X6 216 aaPredicted RBP10.45□□□□□ -0.74
CTSA-209ENST00000493522 POMZP3Q6PJE2 187 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 DHRS4L2Q6PKH6 230 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 SPNS3Q6ZMD2 512 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 NCCRP1Q6ZVX7 275 aaPredicted RBP10.45□□□□□ -0.74
CTSA-209ENST00000493522 ZNF550Q7Z398 422 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 CDH24Q86UP0 819 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ULK2Q8IYT8 1036 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 MICU2Q8IYU8 434 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 CLIP4Q8N3C7 705 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 MEIOBQ8N635 442 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 POC1BQ8TC44 478 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 SLC26A7Q8TE54 656 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 MRGPRX4Q96LA9 322 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ZNF583Q96ND8 569 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 SPOCK3Q9BQ16 436 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ALG2Q9H553 416 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 SPAG4Q9NPE6 437 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 NDE1Q9NXR1 346 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ADA2Q9NZK5 511 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 GMPR2Q9P2T1 348 aaKnown RBP10.45□□□□□ -0.74
CTSA-209ENST00000493522 ZNF337Q9Y3M9 751 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 ITPR3Q14573 2671 aa10.45□□□□□ -0.74
CTSA-209ENST00000493522 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ELOVL7A1L3X0 281 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 C19orf84I3L1E1 186 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 GSTA4O15217 222 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 ADAM11O75078 769 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 GABRA1P14867 456 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 PSMA4P25789 261 aaKnown RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 SFTPDP35247 375 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 IDH2P48735 452 aaKnown RBP10.44□□□□□ -0.74
CTSA-209ENST00000493522 GSK3BP49841 420 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 MNAT1P51948 309 aa10.44□□□□□ -0.74
CTSA-209ENST00000493522 RGS8P57771 180 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms