RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 MED12Q93074 2177 aa8.14□□□□□ -1.11
HDAC3-212ENST00000492407 HTR3EA5X5Y0 456 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 SHISA8B8ZZ34 492 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 COPEO14579 308 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF195O14628 629 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 TNFSF11O14788 317 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 SMAD7O15105 426 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 EIF4E2O60573 245 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 TRIM13O60858 407 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CRLF1O75462 422 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 HMGN2P05204 90 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CD3EP07766 207 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 GUSBP08236 651 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF3P17036 446 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ATP6V1C1P21283 382 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 FKBP2P26885 142 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 SERPINB5P36952 375 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 HPCAL1P37235 193 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 HAAOP46952 286 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ETV1P50549 477 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ATP5J2P56134 94 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 RAC3P60763 192 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CD83Q01151 205 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ITGADQ13349 1161 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CAPRIN1Q14444 709 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 NDUFA5Q16718 116 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 LSM12Q3MHD2 195 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF385BQ569K4 471 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 SLC25A53Q5H9E4 307 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 NCMAPQ5T1S8 102 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 KANK2Q63ZY3 851 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 HEPHL1Q6MZM0 1159 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CDC73Q6P1J9 531 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 MZT2AQ6P582 158 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 BHLHB9Q6PI77 547 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 FIGNL1Q6PIW4 674 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 TFAP2EQ6VUC0 442 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF600Q6ZNG1 722 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CCDC121Q6ZUS5 278 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 P2RY8Q86VZ1 359 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 PRIMA1Q86XR5 153 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ANKRD42Q8N9B4 389 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 OR56A1Q8NGH5 318 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 OR5P2Q8WZ92 322 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 AKAP1Q92667 903 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 FBXW5Q969U6 566 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CIDECQ96AQ7 238 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 FAM120BQ96EK7 910 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 MRGPRX4Q96LA9 322 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 PPP3R2Q96LZ3 170 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 PRPF18Q99633 342 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ACTRT3Q9BYD9 372 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 BCO1Q9HAY6 547 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 EML4Q9HC35 981 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 TNFRSF12AQ9NP84 129 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 ZCCHC3Q9NUD5 404 aaKnown RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 PFDN2Q9UHV9 154 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 CLEC4AQ9UMR7 237 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 RNF115Q9Y4L5 304 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 DNAJC15Q9Y5T4 150 aa8.13□□□□□ -1.11
HDAC3-212ENST00000492407 MAGED1Q9Y5V3 778 aaPredicted RBP8.13□□□□□ -1.11
HDAC3-212ENST00000492407 FN1P02751 2386 aaKnown RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 DUXAA6NLW8 204 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF724A8MTY0 619 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 NPIPB9F8W1W9 429 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 AKAP10O43572 662 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 NPHS1O60500 1241 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 DNAJA2O60884 412 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 NTN1O95631 604 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 AK1P00568 194 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 THBS1P07996 1170 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 DANCRP0C864 163 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 BCKDHAP12694 445 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 KRT4P19013 534 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 IL32P24001 234 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 PCSK6P29122 969 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ATP12AP54707 1039 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 RPL38P63173 70 aaKnown RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 MRPS15P82914 257 aaKnown RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ZNF117Q03924 483 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 SELENBP1Q13228 472 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 CD226Q15762 336 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 SNCBQ16143 134 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 UGT3A2Q3SY77 523 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 CEP78Q5JTW2 689 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 CLEC6AQ6EIG7 209 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ANKRD26P1Q6NSI1 321 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 Q6ZT83 130 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 FCRLAQ7L513 359 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 ZAR1Q86SH2 424 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 WFDC8Q8IUA0 241 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 TUSC5Q8IXB3 177 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 CCDC63Q8NA47 563 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 OR2T11Q8NH01 316 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 FBXO27Q8NI29 283 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
HDAC3-212ENST00000492407 SFXN5Q8TD22 340 aa8.12□□□□□ -1.11
HDAC3-212ENST00000492407 GPR119Q8TDV5 335 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms