RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 H6PDO95479 791 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 GUSBP08236 651 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 PGCP20142 388 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 CRYGSP22914 178 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 PGM1P36871 562 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 SESN3P58005 492 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 MERTKQ12866 999 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 SYPL1Q16563 259 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 C3orf33Q6P1S2 294 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
TOM1-215ENST00000491987 C22orf34Q6ZV56 151 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 FCRLAQ7L513 359 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 ANKFN1Q8N957 763 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 OIT3Q8WWZ8 545 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 ST8SIA1Q92185 356 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 ZG16BQ96DA0 208 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 PIK3IP1Q96FE7 263 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 OR5B2Q96R09 309 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 SLC35A3Q9Y2D2 325 aa13.38□□□□□ -0.27
TOM1-215ENST00000491987 CLDN24A6NM45 220 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 RFXANKO14593 260 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 KLF11O14901 512 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 UBDO15205 165 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 DIAPH2O60879 1101 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 SLC22A3O75751 556 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 PRKD3O94806 890 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ENPP1P22413 925 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 RYKP34925 604 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ANXA11P50995 505 aaKnown RBP13.37□□□□□ -0.27
TOM1-215ENST00000491987 LRRC74AQ0VAA2 488 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 RNPS1Q15287 305 aaKnown RBP13.37□□□□□ -0.27
TOM1-215ENST00000491987 GSTA3Q16772 222 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 DEFB113Q30KQ7 82 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 COX20Q5RI15 118 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 STAC2Q6ZMT1 411 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 PLEKHM3Q6ZWE6 761 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 NUFIP2Q7Z417 695 aaKnown RBP13.37□□□□□ -0.27
TOM1-215ENST00000491987 STK32CQ86UX6 486 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 FAM71CQ8NEG0 241 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ZNF563Q8TA94 476 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 MBD6Q96DN6 1003 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ALPK1Q96QP1 1244 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 SLC38A1Q9H2H9 487 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 SERINC1Q9NRX5 453 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.37□□□□□ -0.27
TOM1-215ENST00000491987 SLC6A13Q9NSD5 602 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ACER3Q9NUN7 267 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 KLHL13Q9P2N7 655 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
TOM1-215ENST00000491987 IL6P05231 212 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 CHRM4P08173 479 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 KLK2P20151 261 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 RAC3P60763 192 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 PLAURQ03405 335 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 AP1ARQ63HQ0 302 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 BEND4Q6ZU67 534 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 TUSC5Q8IXB3 177 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 OR9I1Q8NGQ6 314 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 CNOT9Q92600 299 aaKnown RBP13.36□□□□□ -0.27
TOM1-215ENST00000491987 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
TOM1-215ENST00000491987 HS3ST6Q96QI5 342 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 FANCFQ9NPI8 374 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 CTPS2Q9NRF8 586 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 LIPT1Q9Y234 373 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 USH1CQ9Y6N9 552 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 MPDZO75970 2070 aa13.36□□□□□ -0.27
TOM1-215ENST00000491987 SMAD9O15198 467 aaKnown RBP13.35□□□□□ -0.27
TOM1-215ENST00000491987 ANP32DO95626 131 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 KRT75O95678 551 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 THBDP07204 575 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 NR2F1P10589 423 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 CD53P19397 219 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 KCNJ10P78508 379 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 TXNL4AP83876 142 aaKnown RBP13.35□□□□□ -0.27
TOM1-215ENST00000491987 SYT14P1Q58G82 188 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 LRRC74BQ6ZQY2 392 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 SLC43A2Q8N370 569 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 ARFGAP2Q8N6H7 521 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 WDR60Q8WVS4 1066 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 ACTR6Q9GZN1 396 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 GP6Q9HCN6 339 aa13.35□□□□□ -0.27
TOM1-215ENST00000491987 EXOSC3Q9NQT5 275 aaKnown RBP13.35□□□□□ -0.27
TOM1-215ENST00000491987 SDR39U1Q9NRG7 319 aaPredicted RBP13.35□□□□□ -0.27
TOM1-215ENST00000491987 AKAP6Q13023 2319 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 AGAP5A6NIR3 686 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 AP3D1O14617 1153 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 ADAM11O75078 769 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 FESP07332 822 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 YES1P07947 543 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 TFPIP10646 304 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 ETFAP13804 333 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 CD99P14209 185 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 PPP3CBP16298 524 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 APOBEC1P41238 236 aaKnown RBP13.34□□□□□ -0.27
TOM1-215ENST00000491987 DIO1P49895 249 aa13.34□□□□□ -0.27
TOM1-215ENST00000491987 POLR2JP52435 117 aaKnown RBP13.34□□□□□ -0.27
TOM1-215ENST00000491987 PPP2R2AP63151 447 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms