RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 HPGDP15428 266 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 PRKCAP17252 672 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 COL8A2P25067 703 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 CALCRP30988 508 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 DIO1P49895 249 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 RAE1P78406 368 aaKnown RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 ILF2Q12905 390 aaKnown RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 SELENBP1Q13228 472 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 HIKESHIQ53FT3 197 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 ELFN2Q5R3F8 820 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 RBMS3Q6XE24 437 aaKnown RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 SPATA21Q7Z572 469 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 CDK20Q8IZL9 346 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 C1orf162Q8NEQ5 155 aaPredicted RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 OR4F6Q8NGB9 312 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 CEP70Q8NHQ1 597 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 FBXO30Q8TB52 745 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 SELENOMQ8WWX9 145 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 ELP4Q96EB1 424 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 CPSF2Q9P2I0 782 aaKnown RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 TXNDC16Q9P2K2 825 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 GNG14A0A1W2PPG7 69 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 SCDO00767 359 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 PCDH7O60245 1069 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 FSHBP01225 129 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 CDH2P19022 906 aaPredicted RBP11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 OMGP23515 440 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 THBS4P35443 961 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 MYBPC1Q00872 1141 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 PDIA2Q13087 525 aaKnown RBP11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 HEPACAMQ14CZ8 416 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 PDK3Q15120 406 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 KLHL24Q6TFL4 600 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 CENPLQ8N0S6 344 aaPredicted RBP11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 SLC16A11Q8NCK7 471 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 RHEBL1Q8TAI7 183 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 PHOSPHO1Q8TCT1 267 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 GPR119Q8TDV5 335 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 C16orf78Q8WTQ4 265 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 CKAP2Q8WWK9 683 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 CPNE1Q99829 537 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 KATNB1Q9BVA0 655 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 GLIPR2Q9H4G4 154 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 SEC61A2Q9H9S3 476 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 BRF2Q9HAW0 419 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 UBQLN4Q9NRR5 601 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 SLC7A10Q9NS82 523 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 CARD8Q9Y2G2 431 aa11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 TNPO3Q9Y5L0 923 aaKnown RBP11.8□□□□□ -0.52
EXOSC3-207ENST00000490516 A0A0G2JMP0 313 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 A0A0X1KG70 313 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 A0A1W2PQD3 144 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 SULT2B1O00204 365 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 PLPP2O43688 288 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 KCNK2O95069 426 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 NKX2-2O95096 273 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 MPZL1O95297 269 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 CHN1P15882 459 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 NPR2P20594 1047 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 MAP3K8P41279 467 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 FNTAP49354 379 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 P2RX1P51575 399 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 ARL4CP56559 192 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 NAAAQ02083 359 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 HGFACQ04756 655 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 NDUFAF6Q330K2 333 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 GALNT18Q6P9A2 607 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 CASP12Q6UXS9 341 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 Q6ZPA2 131 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 RPS27LQ71UM5 84 aaKnown RBP11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 DOK3Q7L591 496 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 MTDHQ86UE4 582 aaKnown RBP11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 RELL1Q8IUW5 271 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 OR4M2Q8NGB6 313 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 EBPLQ9BY08 206 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 QRSL1Q9H0R6 528 aaKnown RBP11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 VPS29Q9UBQ0 182 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 UPB1Q9UBR1 384 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 ACTL7BQ9Y614 415 aa11.79□□□□□ -0.52
EXOSC3-207ENST00000490516 M0QZ24 198 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 PPP6CO00743 305 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 PIN1P1O15428 100 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 SLITRK5O94991 958 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 HPXP02790 462 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 CECR9P0C854 216 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ACP2P11117 423 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 SSTR1P30872 391 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF75DP51815 510 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 TGFBR3Q03167 851 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 BAMBIQ13145 260 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 TUSC1Q2TAM9 212 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 GGTA1PQ4G0N0 100 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF311Q5JNZ3 666 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 CCNJQ5T5M9 372 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 TSPO2Q5TGU0 170 aa11.78□□□□□ -0.52
EXOSC3-207ENST00000490516 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms