RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TBX19O60806 448 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 HMGN2P05204 90 aaKnown RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 GSTA1P08263 222 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 BMP4P12644 408 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 CASQ1P31415 396 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 PDLIM4P50479 330 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 CHRNB3Q05901 458 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 SQLEQ14534 574 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 QPRTQ15274 297 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 TIGD2Q4W5G0 525 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 CDC73Q6P1J9 531 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 ZNF572Q7Z3I7 529 aaPredicted RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 TMCO5AQ8N6Q1 288 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 ZNF614Q8N883 585 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 OR5W2Q8NH69 310 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 CLHC1Q8NHS4 586 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 C3orf49Q96BT1 292 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 METTL2AQ96IZ6 378 aaKnown RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 PIMREGQ9BSJ6 248 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 QRSL1Q9H0R6 528 aaKnown RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 PIGUQ9H490 435 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 SIRT3Q9NTG7 399 aaPredicted RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 ZCCHC3Q9NUD5 404 aaKnown RBP12.26□□□□□ -0.45
VARS-227ENST00000489979 TRAF6Q9Y4K3 522 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 PTGDR2Q9Y5Y4 395 aa12.26□□□□□ -0.45
VARS-227ENST00000489979 A0A087WUV0 522 aaPredicted RBP12.25□□□□□ -0.45
VARS-227ENST00000489979 IGHV4-61A0A0C4DH41 118 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 EXOC1LA0A1B0GW35 172 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 SDC1P18827 310 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 PRPH2P23942 346 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 GCAP28676 217 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 APOBEC3AP31941 199 aaPredicted RBP12.25□□□□□ -0.45
VARS-227ENST00000489979 NR4A2P43354 598 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 DIO1P49895 249 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 CCR4P51679 360 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 ATP12AP54707 1039 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 FOXG1P55316 489 aaPredicted RBP12.25□□□□□ -0.45
VARS-227ENST00000489979 PDE7AQ13946 482 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 CBFBQ13951 182 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 DCST2Q5T1A1 773 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 C3orf33Q6P1S2 294 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 TMPPEQ6ZT21 453 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 TOR1AIP2Q8NFQ8 470 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 APH1AQ96BI3 265 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 ARL8AQ96BM9 186 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 CCT7Q99832 543 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 C1orf109Q9NX04 203 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 TAS2R16Q9NYV7 291 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 EMC3Q9P0I2 261 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 BAIAP2L1Q9UHR4 511 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
VARS-227ENST00000489979 DTNAQ9Y4J8 743 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 KCNE3Q9Y6H6 103 aa12.25□□□□□ -0.45
VARS-227ENST00000489979 IGKV3D-15A0A087WSY6 115 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ESPNB1AK53 854 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 NPIPB9F8W1W9 429 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 SULT2B1O00204 365 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 NDUFS8O00217 210 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ETV2O00321 342 aaPredicted RBP12.24□□□□□ -0.45
VARS-227ENST00000489979 SLC28A1O00337 649 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ZNF264O43296 627 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 TGFAP01135 160 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 UROSP10746 265 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 GABRA6Q16445 453 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 CARTPTQ16568 116 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 CLEC6AQ6EIG7 209 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ABLIM2Q6H8Q1 611 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FRMD7Q6ZUT3 714 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 MTDHQ86UE4 582 aaKnown RBP12.24□□□□□ -0.45
VARS-227ENST00000489979 WDR31Q8NA23 367 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ADAMTS15Q8TE58 950 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FBXO17Q96EF6 278 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 C1orf159Q96HA4 380 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FCRL1Q96LA6 429 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 MUS81Q96NY9 551 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FMO2Q99518 471 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 TRMOQ9BU70 441 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 TSPYL1Q9H0U9 437 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FKRPQ9H9S5 495 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ASB6Q9NWX5 421 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 FKBP7Q9Y680 259 aa12.24□□□□□ -0.45
VARS-227ENST00000489979 ZNF716A6NP11 495 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 G3V2L1 256 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 H3BQF6 201 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
VARS-227ENST00000489979 CYP7B1O75881 506 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 ITGA5P08648 1049 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 MYL2P10916 166 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 UBL4AP11441 157 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 NTF4P34130 210 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 CSNK2A1P68400 391 aaPredicted RBP12.23□□□□□ -0.45
VARS-227ENST00000489979 PHC1P78364 1004 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 MLC1Q15049 377 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 PDK3Q15120 406 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 MST1LQ2TV78 715 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 CR1LQ2VPA4 569 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 IQCCQ4KMZ1 466 aa12.23□□□□□ -0.45
VARS-227ENST00000489979 OR7E24Q6IFN5 339 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms