RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 IGHV4-39P01824 125 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 UBTFL6P0CB48 400 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 UBL4AP11441 157 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 CCNA2P20248 432 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 IGHV1-2P23083 117 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 ADH6P28332 368 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 MAPK1P28482 360 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 FOXG1P55316 489 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 SESN3P58005 492 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 ITGADQ13349 1161 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 LSM12Q3MHD2 195 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 ZNF672Q499Z4 452 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 RIMKLAQ8IXN7 391 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 PSMA8Q8TAA3 256 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 PIWIL2Q8TC59 973 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 RAB8BQ92930 207 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 HDHD5Q9BXW7 423 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 REG4Q9BYZ8 158 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 HOXD1Q9GZZ0 328 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 HEATR1Q9H583 2144 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
ERGIC3-217ENST00000488935 GJE1A6NN92 205 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 CPSF4O95639 269 aaKnown RBP14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 CD8AP01732 235 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 FESP07332 822 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 OR12D1P0DN82 309 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 RYKP34925 604 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 OR3A2P47893 321 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 RAC3P60763 192 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 SPOCK1Q08629 439 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 MERTKQ12866 999 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 SELENBP1Q13228 472 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 SKP2Q13309 424 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 PDCD2Q16342 344 aaPredicted RBP14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 TOR1AIP2Q8NFQ8 470 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 HSD17B8Q92506 261 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 ZG16BQ96DA0 208 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 SLC35G5Q96KT7 338 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 MRGPRX4Q96LA9 322 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 C1QTNF6Q9BXI9 259 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 TRIM2Q9C040 744 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 OR10A4Q9H209 315 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 SLCO5A1Q9H2Y9 848 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 OR51I1Q9H343 314 aa14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 ESRP2Q9H6T0 727 aaKnown RBP14.06□□□□□ -0.16
ERGIC3-217ENST00000488935 RNF103-CHMP3A0A140T963 221 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CLDN24A6NM45 220 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 SHISA9B4DS77 424 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CYTIPO60759 359 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 UGT2B17O75795 530 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 HSPA4LO95757 839 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 TFPIP10646 304 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 DDX5P17844 614 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 NTF4P34130 210 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 RPL3P39023 403 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 SUMO3P55854 103 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 PHC1P78364 1004 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CHRNEQ04844 493 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CBFBQ13951 182 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 PPA1Q15181 289 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 SLC25A53Q5H9E4 307 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 TNFAIP8L2Q6P589 184 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 OR4A15Q8NGL6 344 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 SFXN5Q8TD22 340 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 BHLHE41Q9C0J9 482 aaPredicted RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 OR11A1Q9GZK7 315 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 LAT2Q9GZY6 243 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 BCO1Q9HAY6 547 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 HHATLQ9HCP6 504 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CTPS2Q9NRF8 586 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 ATAD3AQ9NVI7 634 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 MKS1Q9NXB0 559 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 CISD1Q9NZ45 108 aaKnown RBP14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
ERGIC3-217ENST00000488935 PLCE1Q9P212 2302 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 GPRIN2O60269 458 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 EIF4E2O60573 245 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 CRLF1O75462 422 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 RAD51DO75771 328 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 CSTAP01040 98 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 BPGMP07738 259 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 PRPS1L1P21108 318 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 DIO1P49895 249 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 ZNF83P51522 516 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 NME5P56597 212 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 VSNL1P62760 191 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 IFFO1Q0D2I5 559 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 C9orf135Q5VTT2 229 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 Q6ZT83 130 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 CCDC103Q8IW40 242 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 ZNF100Q8IYN0 542 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 UBE2J2Q8N2K1 259 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 OR52N5Q8NH56 324 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 XAGE5Q8WWM1 108 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 TRMT61AQ96FX7 289 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 ARL5BQ96KC2 179 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 PRPF18Q99633 342 aaKnown RBP14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 POTEKPQ9BYX7 375 aa14.04□□□□□ -0.16
ERGIC3-217ENST00000488935 AKTIPQ9H8T0 292 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms