RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 RNF220Q5VTB9 566 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 PTOV1Q86YD1 416 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 LILRA2Q8N149 483 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 RELL2Q8NC24 303 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 FIG4Q92562 907 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 KLHL15Q96M94 604 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 TM9SF2Q99805 663 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 NSRP1Q9H0G5 558 aaKnown RBP14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 TMEM38AQ9H6F2 299 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 RLIMQ9NVW2 624 aa14.39□□□□□ -0.11
ERGIC3-216ENST00000488384 A0A0J9YW62 118 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 GMNCA6NCL1 334 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SLC22A20A6NK97 555 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 ADAMDEC1O15204 470 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SNX3O60493 162 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 ME2P23368 584 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 RYKP34925 604 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SFTPDP35247 375 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SLC6A8P48029 635 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 RPS3AP61247 264 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 CDK6Q00534 326 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 FOXF2Q12947 444 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SELENBP1Q13228 472 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 SCARB2Q14108 478 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 PON3Q15166 354 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 ESPNLQ6ZVH7 1005 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 PLEKHM3Q6ZWE6 761 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 OR10D3Q8NH80 312 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 OR2V1Q8NHB1 315 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 FNDC9Q8TBE3 224 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 RSPO3Q9BXY4 272 aaPredicted RBP14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 KAT8Q9H7Z6 458 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 NPDC1Q9NQX5 325 aaPredicted RBP14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 ACER3Q9NUN7 267 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 STOML1Q9UBI4 398 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 ZNF175Q9Y473 711 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 MED12LQ86YW9 2145 aa14.38□□□□□ -0.11
ERGIC3-216ENST00000488384 INTS1Q8N201 2190 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 LOC100653049A0A140TA62 436 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 TNFSF11O14788 317 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CCDC22O60826 627 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 KRT34O76011 436 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 RCBTB2O95199 551 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 PABPC4LP0CB38 370 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 TMIGD3P0DMS9 266 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 ETS2P15036 469 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 BMP5P22003 454 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CTSSP25774 331 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 EIF1AXP47813 144 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 EPS8Q12929 822 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 LARS2Q15031 903 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CYP51A1Q16850 503 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 SLC25A35Q3KQZ1 300 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 MMEL1Q495T6 779 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 REEP3Q6NUK4 255 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CHMP1BQ7LBR1 199 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 NET1Q7Z628 596 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 LSRQ86X29 649 aaPredicted RBP14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 TREML1Q86YW5 311 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 GCNT2Q8N0V5 402 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CLIP4Q8N3C7 705 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 POU5F2Q8N7G0 328 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 ZNF563Q8TA94 476 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 TMEM234Q8WY98 164 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 LRRC58Q96CX6 371 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CCDC106Q9BWC9 280 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 SPATA9Q9BWV2 254 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 COQ10BQ9H8M1 238 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 CHST11Q9NPF2 352 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 KCNJ16Q9NPI9 418 aa14.37□□□□□ -0.11
ERGIC3-216ENST00000488384 HCFC1P51610 2035 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 CFAP73A6NFT4 308 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 FAAHO00519 579 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 DVL2O14641 736 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 CXCL13O43927 109 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 AQP8O94778 261 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 MERTKQ12866 999 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 CYLC2Q14093 348 aaPredicted RBP14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 RABL3Q5HYI8 236 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 ZNF311Q5JNZ3 666 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 HBMQ6B0K9 141 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 NANOGP8Q6NSW7 305 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 C3orf33Q6P1S2 294 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 GRINAQ7Z429 371 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 P4HA3Q7Z4N8 544 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 CPLX4Q7Z7G2 160 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 COMTD1Q86VU5 262 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 ZZZ3Q8IYH5 903 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 ZNF440Q8IYI8 595 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 ACBD4Q8NC06 268 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 HIPK4Q8NE63 616 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 ATP6V1C2Q8NEY4 427 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 OR8J3Q8NGG0 315 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 INTS12Q96CB8 462 aaKnown RBP14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 RCN3Q96D15 328 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 MYLK2Q9H1R3 596 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 NANOGQ9H9S0 305 aa14.36□□□□□ -0.11
ERGIC3-216ENST00000488384 RNF122Q9H9V4 155 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms