RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 A0A087WZY1 265 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 IGHV2-70DA0A0C4DH43 119 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 MSH4O15457 936 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 MAGEB4O15481 346 aaPredicted RBP2.82□□□□□ -1.96
PTEN-204ENST00000487939 LANCL1O43813 399 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 GNA14O95837 355 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 IGHV4-34P06331 123 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 CYP2F1P24903 491 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 HTR2AP28223 471 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 IL1RL1Q01638 556 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 ARL6IP1Q15041 203 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 CYB5R2Q6BCY4 276 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 SVOPLQ8N434 492 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 SRSF12Q8WXF0 261 aaKnown RBP2.82□□□□□ -1.96
PTEN-204ENST00000487939 UCN3Q969E3 161 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 SLC6A7Q99884 636 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 SMYD3Q9H7B4 428 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 UGT2A1Q9Y4X1 527 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 CACNG2Q9Y698 323 aa2.82□□□□□ -1.96
PTEN-204ENST00000487939 IGLV3-16A0A075B6K0 115 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 A0A1W2PNV4 684 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CTAGE5O15320 804 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CLDN3O15551 220 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 NPIPB7O75200 414 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ZNF780AO75290 641 aaPredicted RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 TRIM16O95361 564 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 KLF8O95600 359 aaPredicted RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 CALCBP10092 127 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 PGCP20142 388 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 TPSB2P20231 275 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CYP2B6P20813 491 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 COX7A1P24310 79 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 NUDT1P36639 197 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CTRLP40313 264 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 HNRNPA3P51991 378 aaKnown RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 TPSAB1Q15661 275 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CDC37Q16543 378 aaPredicted RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 TMEM41BQ5BJD5 291 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 RABGAP1LQ5R372 815 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 C1orf146Q5VVC0 180 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ASPHD2Q6ICH7 369 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ZCCHC12Q6PEW1 402 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CCDC137Q6PK04 289 aaKnown RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 ISLR2Q6UXK2 745 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 TPRA1Q86W33 373 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CENPLQ8N0S6 344 aaPredicted RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 FAM71E2Q8N5Q1 922 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ZNF433Q8N7K0 673 aaPredicted RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 OR51G2Q8NGK0 314 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CHRDL1Q9BU40 450 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 NUDT15Q9NV35 164 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ACTR3BQ9P1U1 418 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ZNF225Q9UK10 706 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 PRPF19Q9UMS4 504 aaKnown RBP2.81□□□□□ -1.96
PTEN-204ENST00000487939 ASF1AQ9Y294 204 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 ALG6Q9Y672 507 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 CDC42BPBQ9Y5S2 1711 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 GTF3C1Q12789 2109 aa2.81□□□□□ -1.96
PTEN-204ENST00000487939 THSD7BQ9C0I4 1608 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 ASTN1O14525 1302 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 FRMPD4Q14CM0 1322 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 RSPH10B2B2RC85 870 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 MFN2O95140 757 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 INSP01308 110 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 H2BFMP0C1H6 154 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 RSPH10BP0C881 870 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 TOP1P11387 765 aaKnown RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 YWHABP31946 246 aaKnown RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 CSNK1DP48730 415 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 AP3M2P53677 418 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 NUCB2P80303 420 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 EWSR1Q01844 656 aaKnown RBP eCLIP2.8□□□□□ -1.96
PTEN-204ENST00000487939 LRRC63Q05C16 580 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 CUL1Q13616 776 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 KRTAP5-5Q701N2 237 aaPredicted RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 DHRSXQ8N5I4 330 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 ARIH2OSQ8N7S6 290 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 OR10A7Q8NGE5 316 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 CCDC110Q8TBZ0 833 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 PAQR8Q8TEZ7 354 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 MRPS31Q92665 395 aaKnown RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 RDH5Q92781 318 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 RPL3LQ92901 407 aaKnown RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 PGLYRP4Q96LB8 373 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 GAL3ST1Q99999 423 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 RWDD1Q9H446 243 aaPredicted RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 NXF3Q9H4D5 531 aaKnown RBP2.8□□□□□ -1.96
PTEN-204ENST00000487939 SLC25A22Q9H936 323 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 AIG1Q9NVV5 245 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 GSTK1Q9Y2Q3 226 aa2.8□□□□□ -1.96
PTEN-204ENST00000487939 TRBV6-6A0A0A6YYG2 114 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 GJE1A6NN92 205 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 KIF2AO00139 706 aaPredicted RBP2.79□□□□□ -1.96
PTEN-204ENST00000487939 HCRTR1O43613 425 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 PRKYO43930 277 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 MBD3O95983 291 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 ANXA13P27216 316 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 ADSSP30520 456 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 ACADVLP49748 655 aa2.79□□□□□ -1.96
PTEN-204ENST00000487939 PRKXP51817 358 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms