RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SPATA6LQ8N4H0 392 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 NKAPQ8N5F7 415 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 OR2V1Q8NHB1 315 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 FAM110BQ8TC76 370 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 ANKRD49Q8WVL7 239 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 CMTM5Q96DZ9 223 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 L3HYPDHQ96EM0 354 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 C1orf147Q96MC9 270 aaPredicted RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 OR52B2Q96RD2 323 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 C1QTNF5Q9BXJ0 243 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 RTN4RQ9BZR6 473 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 PTGES2Q9H7Z7 377 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 ZMAT3Q9HA38 289 aaKnown RBP10.18□□□□□ -0.78
TRIM56-204ENST00000487252 G6PC2Q9NQR9 355 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 STOML1Q9UBI4 398 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 ZDHHC2Q9UIJ5 367 aa10.18□□□□□ -0.78
TRIM56-204ENST00000487252 A0A0A6YYD5 115 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 A0A0J9YW62 118 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CCDC189A1A4V9 331 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 TRPC5OSA6NMA1 111 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SHISA8B8ZZ34 492 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SDHDO14521 159 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 FADS1O60427 444 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SH3BGRLO75368 114 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PDE5AO76074 875 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PSMG1O95456 288 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PABPC4LP0CB38 370 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CT45A8P0DMV1 189 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CT45A9P0DMV2 189 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CPMP14384 443 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 DAOP14920 347 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 EPORP19235 508 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 IMPDH1P20839 514 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 IGHV1-2P23083 117 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PSMA4P25789 261 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 OR3A2P47893 321 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF83P51522 516 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PNLIPRP2P54317 469 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ACTR3P61158 418 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SRSF4Q08170 494 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF239Q16600 458 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 BEAN1Q3B7T3 259 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 LSM12Q3MHD2 195 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CT45A2Q5DJT8 189 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 OR52E8Q6IFG1 317 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 FRMD7Q6ZUT3 714 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ESPNLQ6ZVH7 1005 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ISCA2Q86U28 154 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 LAS2Q8IYD9 372 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 RHEBL1Q8TAI7 183 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ACTRT2Q8TDY3 377 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CMTM7Q96FZ5 175 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 CITED1Q99966 193 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 VRK1Q99986 396 aaPredicted RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 RACGAP1Q9H0H5 632 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 OR51B5Q9H339 312 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 MAT2BQ9NZL9 334 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 STX18Q9P2W9 335 aaKnown RBP10.17□□□□□ -0.78
TRIM56-204ENST00000487252 SLC7A8Q9UHI5 535 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 PCDHB14Q9Y5E9 798 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 ATP23Q9Y6H3 246 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 RYR2Q92736 4967 aa10.17□□□□□ -0.78
TRIM56-204ENST00000487252 IGLV3-32A0A0A0MS00 114 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 M0QZ24 198 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 TNFSF11O14788 317 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 CIB2O75838 187 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 KRT36O76013 467 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 FSHBP01225 129 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 YES1P07947 543 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 CD1DP15813 335 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 NCF2P19878 526 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 NT5EP21589 574 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 MDKP21741 143 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 EDNRAP25101 427 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 PIK3R1P27986 724 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 EVI2BP34910 448 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 GGT5P36269 586 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 PPOXP50336 477 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 GTF2A1P52655 376 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 LAPTM5Q13571 262 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 EXOSC7Q15024 291 aaKnown RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 ZNHIT3Q15649 155 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 FAM111BQ6SJ93 734 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 BPIFB2Q8N4F0 458 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 ZNF433Q8N7K0 673 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 CCNYL1Q8N7R7 359 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 RP9Q8TA86 221 aaKnown RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 WFDC12Q8WWY7 111 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 DVL3Q92997 716 aaPredicted RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 RGMAQ96B86 450 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 GSTO2Q9H4Y5 243 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 DDX31Q9H8H2 851 aaKnown RBP10.16□□□□□ -0.78
TRIM56-204ENST00000487252 FKRPQ9H9S5 495 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 PRSS50Q9UI38 385 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 OARD1Q9Y530 152 aa10.16□□□□□ -0.78
TRIM56-204ENST00000487252 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms