RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 EXOSC3Q9NQT5 275 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 SERINC1Q9NRX5 453 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 ACER3Q9NUN7 267 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 DNAJB12Q9NXW2 375 aaKnown RBP17.19■□□□□ 0.34
SNX17-206ENST00000484886 KLHL14Q9P2G3 628 aa17.19■□□□□ 0.34
SNX17-206ENST00000484886 PKDREJQ9NTG1 2253 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 A0A1W2PNV4 684 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ADAMDEC1O15204 470 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 EFNA2O43921 213 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 EEF1A1P68104 462 aaKnown RBP17.18■□□□□ 0.34
SNX17-206ENST00000484886 CTU2Q2VPK5 515 aaKnown RBP17.18■□□□□ 0.34
SNX17-206ENST00000484886 SLC25A53Q5H9E4 307 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 EEF1A1P5Q5VTE0 462 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 C3orf33Q6P1S2 294 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ZNF836Q6ZNA1 936 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 LUZP2Q86TE4 346 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 NFKBIDQ8NI38 313 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 BBS10Q8TAM1 723 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 TSPEARQ8WU66 669 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 OSTF1Q92882 214 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ZNF524Q96C55 264 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ADGRG7Q96K78 797 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ZNF232Q9UNY5 417 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 ZNF443Q9Y2A4 671 aaPredicted RBP17.18■□□□□ 0.34
SNX17-206ENST00000484886 DSPPQ9NZW4 1301 aa17.18■□□□□ 0.34
SNX17-206ENST00000484886 NBPF19A0A087WUL8 3843 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 TRBV5-3A0A0A0MS03 114 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 CFAP73A6NFT4 308 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 AP3D1O14617 1153 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 SMNDC1O75940 238 aaKnown RBP eCLIP17.17■□□□□ 0.34
SNX17-206ENST00000484886 AQP8O94778 261 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 NTN1O95631 604 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 CRHP06850 196 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 IDH2P48735 452 aaKnown RBP17.17■□□□□ 0.34
SNX17-206ENST00000484886 MMEL1Q495T6 779 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 PLEKHM3Q6ZWE6 761 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 GDF7Q7Z4P5 450 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 RETREG3Q86VR2 466 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 DPP10Q8N608 796 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 RNASE6Q93091 150 aaKnown RBP17.17■□□□□ 0.34
SNX17-206ENST00000484886 CGREF1Q99674 301 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 CPPED1Q9BRF8 314 aaPredicted RBP17.17■□□□□ 0.34
SNX17-206ENST00000484886 PIGMQ9H3S5 423 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 IKZF5Q9H5V7 419 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 RNF122Q9H9V4 155 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 RLIMQ9NVW2 624 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 PACSIN3Q9UKS6 424 aa17.17■□□□□ 0.34
SNX17-206ENST00000484886 SPIN1Q9Y657 262 aaPredicted RBP17.17■□□□□ 0.34
SNX17-206ENST00000484886 SYT5O00445 386 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 DNAJA2O60884 412 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 ARAFP10398 606 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 TFPIP10646 304 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 BMP2P12643 396 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 PRF1P14222 555 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 CPOXP36551 454 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 APOBEC1P41238 236 aaKnown RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 KLF10Q13118 480 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 MYBPHQ13203 477 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 SNTB1Q13884 538 aaKnown RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 MAPRE2Q15555 327 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 CYP51A1Q16850 503 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 RUNDC3AQ59EK9 446 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 ZNF311Q5JNZ3 666 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 PRAMEF8Q5VWM4 474 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 PRAMEF7Q5VXH5 474 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 DMRTC2Q8IXT2 367 aaPredicted RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 ZNF440Q8IYI8 595 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 ZNF317Q96PQ6 595 aaPredicted RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 OR5B2Q96R09 309 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 RBM24Q9BX46 236 aaKnown RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 TRIM8Q9BZR9 551 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 SAR1AQ9NR31 198 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 CTPS2Q9NRF8 586 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 FOXD3Q9UJU5 478 aaPredicted RBP17.16■□□□□ 0.34
SNX17-206ENST00000484886 CLEC4AQ9UMR7 237 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 IFT52Q9Y366 437 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 CACNA1DQ01668 2161 aa17.16■□□□□ 0.34
SNX17-206ENST00000484886 CRYBG3Q68DQ2 2970 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 A0A1W2PNR3 127 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CDHR4A6H8M9 788 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 ETV2O00321 342 aaPredicted RBP17.15■□□□□ 0.34
SNX17-206ENST00000484886 PGM3O95394 542 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 THBS1P07996 1170 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 GKN3PP0CG01 181 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 IGFBP2P18065 325 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 GPX2P18283 190 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CCNA2P20248 432 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 SLC6A2P23975 617 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 DLX5P56178 289 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CTBP2P56545 445 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 MTPNP58546 118 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CDK6Q00534 326 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 PLAURQ03405 335 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 SCARB2Q14108 478 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 CAPRIN1Q14444 709 aaKnown RBP17.15■□□□□ 0.34
SNX17-206ENST00000484886 RNF220Q5VTB9 566 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 REEP3Q6NUK4 255 aa17.15■□□□□ 0.34
SNX17-206ENST00000484886 VWA1Q6PCB0 445 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms