RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	WFDC6	Q9BQY6	131 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	OR2B2	Q9GZK3	357 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	LAT2	Q9GZY6	243 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC6A15	Q9H2J7	730 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC24A3	Q9HC58	644 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	ACKR4	Q9NPB9	350 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	SPAG4	Q9NPE6	437 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	QPCTL	Q9NXS2	382 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	DNAJB12	Q9NXW2	375 aa	Known RBP	13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	SPRR3	Q9UBC9	169 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882		Q9UFV3	132 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	CD300A	Q9UGN4	299 aa		13.48	□□□□□ -0.25
NR1H3-222	ENST00000483882	HCFC1	P51610	2035 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	DCHS2	Q6V1P9	2916 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	ZNF407	Q9C0G0	2248 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	SHISA8	B8ZZ34	492 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882		M0QX08	132 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	ZNF264	O43296	627 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	HCRTR2	O43614	444 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	HCN1	O60741	890 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	CSTA	P01040	98 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	THBS1	P07996	1170 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	PABPC4L	P0CB38	370 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	UBTFL6	P0CB48	400 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	UBL4A	P11441	157 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	NQO1	P15559	274 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	SRD5A2	P31213	254 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	CEACAM7	Q14002	265 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	VEZF1	Q14119	521 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	TOMM34	Q15785	309 aa	Predicted RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	TMEM44	Q2T9K0	475 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	MRPL2	Q5T653	305 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	ERICH5	Q6P6B1	374 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	EIF3M	Q7L2H7	374 aa	Known RBP	13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	LIX1L	Q8IVB5	337 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	FAM156A	Q8NDB6	213 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	GPR32P1	Q8NGA4	272 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	B4GALNT2	Q8NHY0	566 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	NRGN	Q92686	78 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	C1GALT1C1	Q96EU7	318 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	CDRT15	Q96T59	188 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	ANGPT4	Q9Y264	503 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	AP3M1	Q9Y2T2	418 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	NCKAP5	O14513	1909 aa		13.47	□□□□□ -0.25
NR1H3-222	ENST00000483882	ANKRD17	O75179	2603 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	ELOVL7	A1L3X0	281 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	CDHR4	A6H8M9	788 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882		H3BNH8	94 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	GTPBP1	O00178	669 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	AP3D1	O14617	1153 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	EIF4E2	O60573	245 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	TRAPPC6A	O75865	159 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	OPN1SW	P03999	348 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	PRG2	P13727	222 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	GABRA1	P14867	456 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	IL7R	P16871	459 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	CD247	P20963	164 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	TCEA1	P23193	301 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	DPP4	P27487	766 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	P2RX1	P51575	399 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	MNAT1	P51948	309 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	DSCR4	P56555	118 aa	Predicted RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	DUSP7	Q16829	419 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	ZNF311	Q5JNZ3	666 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	RNF220	Q5VTB9	566 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	DHRS4L2	Q6PKH6	230 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	CMIP	Q8IY22	773 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	POC1B	Q8TC44	478 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	GPR119	Q8TDV5	335 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	ALG2	Q9H553	416 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	MED17	Q9NVC6	651 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	ADA2	Q9NZK5	511 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	B4GALT7	Q9UBV7	327 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC35A3	Q9Y2D2	325 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	SLC6A5	Q9Y345	797 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	IFT52	Q9Y366	437 aa		13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.46	□□□□□ -0.25
NR1H3-222	ENST00000483882	PHF3	Q92576	2039 aa	Known RBP	13.46	□□□□□ -0.26
NR1H3-222	ENST00000483882	FAM47E-STBD1	D6RA91	191 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	FRS3	O43559	492 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	LINGO3	P0C6S8	592 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	GKN3P	P0CG01	181 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	HSD17B1	P14061	328 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	NCK1	P16333	377 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	PSMA4	P25789	261 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	MSX2	P35548	267 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	ACAA2	P42765	397 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	SUMO3	P55854	103 aa	Predicted RBP	13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	DLX5	P56178	289 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	MXRA7	P84157	204 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	SNTB1	Q13884	538 aa	Known RBP	13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	FXN	Q16595	210 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	PLPPR5	Q32ZL2	321 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	SLC25A35	Q3KQZ1	300 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	LIN52	Q52LA3	116 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	DCST1	Q5T197	706 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	RIPPLY2	Q5TAB7	128 aa		13.45	□□□□□ -0.26
NR1H3-222	ENST00000483882	C16orf89	Q6UX73	402 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms