RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PSPHP78330 225 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SSX1Q16384 188 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 TSTQ16762 297 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 DGUOKQ16854 277 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 TRIM61Q5EBN2 209 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 LANCL3Q6ZV70 420 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SLCO6A1Q86UG4 719 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 DTWD2Q8NBA8 298 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 ZHX1-C8orf76Q96EF9 292 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 HSPBAP1Q96EW2 488 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 GAL3ST4Q96RP7 486 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SLC19A3Q9BZV2 496 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 HINT3Q9NQE9 182 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 BAIAP2Q9UQB8 552 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 EXOGQ9Y2C4 368 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SEC16AO15027 2179 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 A0A1W2PQD3 144 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 HTR3EA5X5Y0 456 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 VSTM2BA6NLU5 285 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 NTN3O00634 580 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 MYL12BO14950 172 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF264O43296 627 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 DUSP3P51452 185 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 DCDP81605 110 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 FOXK2Q01167 660 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 MLLT11Q13015 90 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 C1DQ13901 141 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF829Q3KNS6 432 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 HLA-DQA1Q5Y7H0 255 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 WBP2NLQ6ICG8 309 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 PAQR6Q6TCH4 344 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 RTL4Q6ZR62 310 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SLC29A4Q7RTT9 530 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 OAFQ86UD1 273 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 BPHLQ86WA6 291 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 GID4Q8IVV7 300 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 ADOQ96SZ5 270 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 PHOX2BQ99453 314 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 JAM3Q9BX67 310 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 SLIRPQ9GZT3 109 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 OR51E2Q9H255 320 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 MCCC2Q9HCC0 563 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 CMC2Q9NRP2 79 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 PPIEQ9UNP9 301 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 EXOSC1Q9Y3B2 195 aaKnown RBP12.14□□□□□ -0.47
CPNE1-225ENST00000483495 PMF1-BGLAPU3KQ54 211 aa12.14□□□□□ -0.47
CPNE1-225ENST00000483495 OIP5O43482 229 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 ICOSLGO75144 302 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 PPM1BO75688 479 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 MYL12AP19105 171 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 TGFBR1P36897 503 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 SERPINB10P48595 397 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 SLC9A3P48764 834 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 BMXP51813 675 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 NR0B1P51843 470 aaKnown RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 CRYZQ08257 329 aaKnown RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 USP43Q70EL4 1123 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 CXXC5Q7LFL8 322 aaKnown RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 OVCH1Q7RTY7 1134 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 CROCCP3Q8IVE0 287 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 CPOQ8IVL8 374 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 PHOSPHO1Q8TCT1 267 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 SGTBQ96EQ0 304 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 GFM1Q96RP9 751 aaKnown RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 NRSN2Q9GZP1 204 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 LAT2Q9GZY6 243 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 ZBTB20Q9HC78 741 aaPredicted RBP12.13□□□□□ -0.47
CPNE1-225ENST00000483495 ISYNA1Q9NPH2 558 aa12.13□□□□□ -0.47
CPNE1-225ENST00000483495 TRAV27A0A087WT01 109 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 FAM86C2PA6NEL3 165 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TMEM221A6NGB7 291 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IDSB3KWA1 339 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 M0R296 226 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 REM1O75628 298 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 NADKO95544 446 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IGHA1P01876 353 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 SYPP08247 313 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PNMTP11086 282 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 FGF5P12034 268 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 IL12BP29460 328 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PNLIPRP2P54317 469 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 WNT4P56705 351 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 DAB2P98082 770 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 TMED1Q13445 227 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ZNF362Q5T0B9 420 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 NIPAL3Q6P499 406 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 CBLN3Q6UW01 205 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 GDPGP1Q6ZNW5 385 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 ATG4DQ86TL0 474 aaPredicted RBP12.12□□□□□ -0.47
CPNE1-225ENST00000483495 PPP1R3BQ86XI6 285 aa12.12□□□□□ -0.47
CPNE1-225ENST00000483495 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms