RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 ZSCAN32Q9NX65 697 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SIX4Q9UIU6 781 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ANK1P16157 1881 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CCDC88CQ9P219 2028 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TRAV14DV4A0A0A6YYC5 116 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ANKRD61A6NGH8 418 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NSA2O95478 260 aaKnown RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HLA-DPB1P04440 258 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 AHRP35869 848 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GAS1P54826 345 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 RING1Q06587 406 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CSRP2Q16527 193 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF805Q5CZA5 627 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 MFSD14CQ5VZR4 134 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SPRYD7Q5W111 196 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ESPNLQ6ZVH7 1005 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF546Q86UE3 836 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ANGPTL5Q86XS5 388 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 FOXRED2Q8IWF2 684 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF321PQ8N8H1 164 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 RNASE8Q8TDE3 154 aaKnown RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ING5Q8WYH8 240 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 DDA1Q9BW61 102 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF471Q9BX82 626 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TPT1P8Q9HAU6 139 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 IL17BQ9UHF5 180 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CD84Q9UIB8 345 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TNFSF13BQ9Y275 285 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 DOCK1Q14185 1865 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 DOCK5Q9H7D0 1870 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 DSPPQ9NZW4 1301 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 TMEM129A0AVI4 362 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 A6NNC1 897 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SNRPGP15A8MWD9 76 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 E7EQ34 232 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 LRRN3E7EW58 273 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GOSR2O14653 212 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HSPA12AO43301 675 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 UBL3O95164 117 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 SFTA3P0C7M3 94 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 OR12D1P0DN82 309 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HNF1AP20823 631 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 MAGEB1P43366 347 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NDUFA6P56556 154 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 OR10A3P58181 314 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 HMGCS1Q01581 520 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF177Q13360 481 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 MEF2DQ14814 521 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ATXN7L2Q5T6C5 722 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 OR10K2Q6IF99 312 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 PSRC1Q6PGN9 363 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 FAM24BQ8N5W8 94 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 NEK7Q8TDX7 302 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 RNFT2Q96EX2 444 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 MED10Q9BTT4 135 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 DOHHQ9BU89 302 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 LRRN3Q9H3W5 708 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 ACER3Q9NUN7 267 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 GPR55Q9Y2T6 319 aaPredicted RBP7.28□□□□□ -1.24
COL4A5-205ENST00000483338 PCDHB1Q9Y5F3 818 aa7.28□□□□□ -1.24
COL4A5-205ENST00000483338 CCDC187A0A096LP49 1063 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CLIC1O00299 241 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 ITGB1BP1O14713 200 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 GUSBP08236 651 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CD79AP11912 226 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CELP19835 753 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 GJA4P35212 333 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 ADRA1AP35348 466 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 TDGF1P3P51864 188 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CD81P60033 236 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 KHDC3LQ587J8 217 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 MESTQ5EB52 335 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 GDF6Q6KF10 455 aaPredicted RBP7.27□□□□□ -1.25
COL4A5-205ENST00000483338 KIAA1161Q6NSJ0 714 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 PRICKLE2Q7Z3G6 844 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 PARGQ86W56 976 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 THNSL2Q86YJ6 484 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CBARPQ8N350 705 aaPredicted RBP7.27□□□□□ -1.25
COL4A5-205ENST00000483338 ZNF485Q8NCK3 441 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 SDR9C7Q8NEX9 313 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 OR1J4Q8NGS1 313 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 COL26A1Q96A83 441 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 SLC25A36Q96CQ1 311 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 MRGPRX4Q96LA9 322 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 FDXACB1Q9BRP7 624 aaPredicted RBP7.27□□□□□ -1.25
COL4A5-205ENST00000483338 LINC00597Q9H2U6 94 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 FKRPQ9H9S5 495 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 GPN1Q9HCN4 374 aaPredicted RBP7.27□□□□□ -1.25
COL4A5-205ENST00000483338 DOK5Q9P104 306 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 NDOR1Q9UHB4 597 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 CKAP5Q14008 2032 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 A0A0D9SG52 128 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 KANTRA0A1W2PQU2 76 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 NPEPPSL1A6NEC2 478 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 MOXD2PA6NHM9 499 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 SYT5O00445 386 aa7.27□□□□□ -1.25
COL4A5-205ENST00000483338 PHOX2AO14813 284 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms