RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ELP4Q96EB1 424 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OTUB1Q96FW1 271 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 PRRC1Q96M27 445 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 TXN2Q99757 166 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 SOX7Q9BT81 388 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 FNDC11Q9BVV2 318 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ACTRT3Q9BYD9 372 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 GSDMCQ9BYG8 508 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 OR51I1Q9H343 314 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ARMC7Q9H6L4 198 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 NMNAT1Q9HAN9 279 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 LYRM4Q9HD34 91 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 DLL4Q9NR61 685 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 FBXO8Q9NRD0 319 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 POLE3Q9NRF9 147 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 POT1Q9NUX5 634 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PAK1IP1Q9NWT1 392 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 TEX10Q9NXF1 929 aaPredicted RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 GIN1Q9NXP7 522 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 ETAA1Q9NY74 926 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 PTGFRNQ9P2B2 879 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 TRPC4Q9UBN4 977 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 CES1P1Q9UKY3 287 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 MKLN1Q9UL63 735 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 RPL36Q9Y3U8 105 aaKnown RBP7.15□□□□□ -1.26
SNX13-208ENST00000482558 DSPPQ9NZW4 1301 aa7.15□□□□□ -1.26
SNX13-208ENST00000482558 C2orf74A8MZ97 194 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 PRAMEF26H0Y7S4 382 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 HAT1O14929 419 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SLC31A1O15431 190 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 LATO43561 262 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR10H3O60404 316 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR2C1O95371 312 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 AIFM1O95831 613 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 TNFP01375 233 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 IGLV3-19P01714 112 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 RPLP0P05388 317 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 GUSBP08236 651 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR12D1P0DN82 309 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 GAAP10253 952 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 ZNF182P17025 639 aaPredicted RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 GABRB1P18505 474 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 TNFRSF1AP19438 455 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 ELAVL4P26378 380 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 ALDH4A1P30038 563 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 PRKAR1BP31321 381 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 ACAA2P42765 397 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 SLC15A1P46059 708 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 IDH2P48735 452 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 RGS19P49795 217 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 BLKP51451 505 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SRP54P61011 504 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 COPZ1P61923 177 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 RHAGQ02094 409 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SNTB1Q13884 538 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 KCNAB1Q14722 419 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 NCF4Q15080 339 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 PTGES3Q15185 160 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 INAQ16352 499 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 ATG2AQ2TAZ0 1938 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 EIPR1Q53HC9 387 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SLX4IPQ5VYV7 408 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 DUS1LQ6P1R4 473 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 MEX3BQ6ZN04 569 aaKnown RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 ZNF793Q6ZN11 406 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 AHSA2Q719I0 299 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 PLD3Q8IV08 490 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 LRRC25Q8N386 305 aaPredicted RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 AMER2Q8N7J2 671 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SMYD1Q8NB12 490 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR4K14Q8NGD5 310 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR5AN1Q8NGI8 311 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 OR52J3Q8NH60 311 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 APH1BQ8WW43 257 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 GGHQ92820 318 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 RERGQ96A58 199 aaPredicted RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 LGALS12Q96DT0 336 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 TM4SF19Q96DZ7 209 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SAT2Q96F10 170 aaPredicted RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 ABHD8Q96I13 439 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 MS4A4EQ96PG1 132 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 CD180Q99467 661 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 MMP27Q9H306 513 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 XKR8Q9H6D3 395 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 MTHFD2LQ9H903 347 aaPredicted RBP7.14□□□□□ -1.27
SNX13-208ENST00000482558 FGF22Q9HCT0 170 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 ALKBH4Q9NXW9 302 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 SEC14L4Q9UDX3 406 aa7.14□□□□□ -1.27
SNX13-208ENST00000482558 PRR23AA6NEV1 266 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 PRSS29PA6NIE9 313 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 SAGE2PA6NJ88 616 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 SH2D7A6NKC9 451 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 OR52A4PA6NMU1 304 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 TLR4O00206 839 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 KPNA4O00629 521 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 LINC01565O15544 149 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 AIREO43918 545 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 PFDN1O60925 122 aa7.13□□□□□ -1.27
SNX13-208ENST00000482558 NME6O75414 186 aaPredicted RBP7.13□□□□□ -1.27
SNX13-208ENST00000482558 FADS2O95864 444 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms