RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 GTF2IRD2BQ6EKJ0 949 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 IGFL2Q6UWQ7 119 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 RTL4Q6ZR62 310 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ASRGL1Q7L266 308 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 MDGA2Q7Z553 956 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 GTF2IRD2Q86UP8 949 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ZNF619Q8N2I2 560 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ADAMTS16Q8TE57 1224 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 TM9SF4Q92544 642 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 ZG16BQ96DA0 208 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 TMEM68Q96MH6 324 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 HOXD1Q9GZZ0 328 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 RNF32Q9H0A6 362 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 SAP130Q9H0E3 1048 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.62□□□□□ -0.71
HPS4-212ENST00000481910 QRSL1Q9H0R6 528 aaKnown RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 TRIM45Q9H8W5 580 aaPredicted RBP10.62□□□□□ -0.71
HPS4-212ENST00000481910 BCL2L10Q9HD36 194 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 UBQLN4Q9NRR5 601 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
HPS4-212ENST00000481910 GUSBP08236 651 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 FAM87AP0C7U9 286 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 ME2P23368 584 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 HTR1EP28566 365 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 LCN1P31025 176 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 PCGF2P35227 344 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 DCTP40126 519 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 ATP12AP54707 1039 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 HMGN2P46Q86SG4 172 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 HPS6Q86YV9 775 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 FBXW8Q8N3Y1 598 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 ZADH2Q8N4Q0 377 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 ZNF614Q8N883 585 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 CATSPER1Q8NEC5 780 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 BBS10Q8TAM1 723 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 CHPT1Q8WUD6 406 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 FIG4Q92562 907 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 HGDQ93099 445 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 DACT3Q96B18 629 aaPredicted RBP10.61□□□□□ -0.71
HPS4-212ENST00000481910 SIGLEC12Q96PQ1 595 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 NODALQ96S42 347 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 FLRT3Q9NZU0 649 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 CHCHD2Q9Y6H1 151 aaPredicted RBP10.61□□□□□ -0.71
HPS4-212ENST00000481910 NINQ8N4C6 2090 aa10.61□□□□□ -0.71
HPS4-212ENST00000481910 K7EM74 188 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CXCR6O00574 342 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SCDO00767 359 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 KIAA0513O60268 411 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 UGT2B17O75795 530 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 NEURL1O76050 574 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SORBS2O94875 1100 aaKnown RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 ETS2P15036 469 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 NCK1P16333 377 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 IL7RP16871 459 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 TBXA2RP21731 343 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 TBRG1Q3YBR2 411 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 GLYATQ6IB77 296 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 MZT2AQ6P582 158 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 C11orf88Q6PI97 169 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 IGFL3Q6UXB1 125 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 ZNF227Q86WZ6 799 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 KRT73Q86Y46 540 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CCDC36Q8IYA8 594 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 ZNF527Q8NB42 609 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PLPP7Q8NBV4 271 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PSD4Q8NDX1 1056 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SPPL2AQ8TCT8 520 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PAQR8Q8TEZ7 354 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CCDC124Q96CT7 223 aaKnown RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 ZNF607Q96SK3 696 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 TBL1XR1Q9BZK7 514 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PCDHAC1Q9H158 963 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 METTL7AQ9H8H3 244 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 KCNE5Q9UJ90 142 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 DSPPQ9NZW4 1301 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 AGAP5A6NIR3 686 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 L7N2F9 121 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 SLC25A12O75746 678 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PDE9AO76083 593 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PDGFAP04085 211 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 P04436 131 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 CCL3P10147 92 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 SELLP14151 372 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 GGT1P19440 569 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 POU3F4P49335 361 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PRSS12P56730 875 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PCBP3P57721 371 aaKnown RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 RHDQ02161 417 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 COTL1Q14019 142 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 TRIM25Q14258 630 aaKnown RBP10.6□□□□□ -0.71
HPS4-212ENST00000481910 ZNF141Q15928 474 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 FAM209BQ5JX69 171 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PDZK1Q5T2W1 519 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 PRAMEF20Q5VT98 475 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 DCDC5Q6ZRR9 648 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 ULK2Q8IYT8 1036 aa10.6□□□□□ -0.71
HPS4-212ENST00000481910 MINDY2Q8NBR6 621 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms