RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 PEG10Q86TG7 708 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 C1QL4Q86Z23 238 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 C7orf61Q8IZ16 206 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ARL14Q8N4G2 192 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF321PQ8N8H1 164 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 LCN9Q8WX39 176 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 FBXO17Q96EF6 278 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 FAM120BQ96EK7 910 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 KCNC2Q96PR1 638 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 AARSD1Q9BTE6 412 aaKnown RBP11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 ALG8Q9BVK2 526 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TM6SF2Q9BZW4 377 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 WDR26Q9H7D7 661 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 MID1IP1Q9NPA3 183 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 LHX9Q9NQ69 397 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TDP1Q9NUW8 608 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 HCFC1R1Q9NWW0 138 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 C1orf109Q9NX04 203 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 GRHPRQ9UBQ7 328 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 POFUT2Q9Y2G5 429 aa11.79□□□□□ -0.52
RTFDC1-207ENST00000477573 LINC01553A4QN01 128 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 C5orf67F2Z3F1 127 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 MID1O15344 667 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ESR1P03372 595 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SEMG1P04279 462 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SPARCP09486 303 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 LINC00032P0C843 101 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 GIFP27352 417 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CCR2P41597 374 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 AVPR1BP47901 424 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SNRPD1P62314 119 aaKnown RBP11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 DOC2BQ14184 412 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 PTGR1Q14914 329 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF630Q2M218 657 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ZRANB3Q5FWF4 1079 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 XKR7Q5GH72 579 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CDK20Q8IZL9 346 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ZNF687Q8N1G0 1237 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ASB13Q8WXK3 278 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 C12orf66Q96MD2 445 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 PTGES2Q9H7Z7 377 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 PTGDR2Q9Y5Y4 395 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 A0A1W2PPQ1 181 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 GRM6O15303 877 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 EFSO43281 561 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 LANCL1O43813 399 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 HPXP02790 462 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 THBS1P07996 1170 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 GUSBP08236 651 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 HNF1AP20823 631 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SERPINA4P29622 427 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 GKP32189 559 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 MC4RP32245 332 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CD70P32970 193 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 GALNSP34059 522 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CDC42P60953 191 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 RBBP4Q09028 425 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SURF2Q15527 256 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 TEAD2Q15562 447 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 KCNMB1Q16558 191 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 ACSM5Q6NUN0 579 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC30A6Q6NXT4 461 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 TMEM200AQ86VY9 491 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 TPRA1Q86W33 373 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CALHM3Q86XJ0 350 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 VRK3Q8IV63 474 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 STK40Q8N2I9 435 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SYNPOQ8N3V7 929 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 UBAC2Q8NBM4 344 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 RELL2Q8NC24 303 aaPredicted RBP11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CCDC54Q8NEL0 328 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 OR10A7Q8NGE5 316 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 OR9Q2Q8NGE9 314 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 OR5R1Q8NH85 324 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 DNAJB8Q8NHS0 232 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 NETO1Q8TDF5 533 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 WFIKKN2Q8TEU8 576 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 PNPLA2Q96AD5 504 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 VOPP1Q96AW1 172 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 TMEM208Q9BTX3 173 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 TEX101Q9BY14 249 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SMG9Q9H0W8 520 aaKnown RBP11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 CYSLTR2Q9NS75 346 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 SLC25A13Q9UJS0 675 aa11.78□□□□□ -0.52
RTFDC1-207ENST00000477573 A8MWP6 167 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 K7ERQ8 282 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 EIF4E2O60573 245 aaKnown RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 SPDEFO95238 335 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 WISP3O95389 354 aaPredicted RBP11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 DIRAS3O95661 229 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 IFNA17P01571 189 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 ADRA2AP08913 450 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 BMI1P35226 326 aa11.77□□□□□ -0.53
RTFDC1-207ENST00000477573 CDKN1BP46527 198 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms