RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 ASB15Q8WXK1 588 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 PMM1Q92871 262 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 NRBF2Q96F24 287 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 SLC41A3Q96GZ6 507 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 FEVQ99581 238 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 NPAS1Q99742 590 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 HOXD1Q9GZZ0 328 aa16.52■□□□□ 0.24
ATG4B-217ENST00000475693 YARS2Q9Y2Z4 477 aaKnown RBP16.52■□□□□ 0.24
ATG4B-217ENST00000475693 IGF2RP11717 2491 aa16.52■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1W2PPW3 197 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ALG1L2C9J202 215 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ICAM2P13598 275 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CCNA2P20248 432 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 TCEA1P23193 301 aaKnown RBP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 SSR4P51571 173 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 NFATC3Q12968 1075 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 COLEC12Q5KU26 742 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ACER2Q5QJU3 275 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 RBM48Q5RL73 367 aaKnown RBP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 LINC00696Q6ZRV3 163 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CHPT1Q8WUD6 406 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 TMEM255BQ8WV15 326 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 GTPBP3Q969Y2 492 aaKnown RBP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 DNAJA3Q96EY1 480 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 EPYCQ99645 322 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 NIPSNAP1Q9BPW8 284 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 PLA2G3Q9NZ20 509 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 MED12Q93074 2177 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 KLK10O43240 276 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF264O43296 627 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CDC40O60508 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CLIC3O95833 236 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 GASTP01350 101 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ALPLP05186 524 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CCL3P10147 92 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 MST1P26927 711 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 PTGDSP41222 190 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 ALDH3A2P51648 485 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 EPS8Q12929 822 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 NTRK2Q16620 822 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 BROXQ5VW32 411 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 PIK3C3Q8NEB9 887 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 OSBPL10Q9BXB5 764 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 STMN3Q9NZ72 180 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 KLRF1Q9NZS2 232 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 MED11Q9P086 117 aa16.51■□□□□ 0.23
ATG4B-217ENST00000475693 TMEFF2Q9UIK5 374 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 CHCHD2Q9Y6H1 151 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-217ENST00000475693 PIP5K1CO60331 668 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 ITPKBP27987 946 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 IDH2P48735 452 aaKnown RBP16.5■□□□□ 0.23
ATG4B-217ENST00000475693 PPP2R2BQ00005 443 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 DAG1Q14118 895 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 MICAQ29983 383 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 DCDC5Q6ZRR9 648 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 LINC00299Q6ZSB3 139 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 RANBP3LQ86VV4 465 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-217ENST00000475693 GRAMD2AQ8IUY3 354 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 OR10G2Q8NGC3 310 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 GPA33Q99795 319 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 ARMC7Q9H6L4 198 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 ATP13A2Q9NQ11 1180 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 A0A087WUU8 490 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1B0GWA3 101 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 KPNA4O00629 521 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-217ENST00000475693 LYPD3O95274 346 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 NUDT14O95848 222 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 EPHA2P29317 976 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 HMGA2P52926 109 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 H3F3CQ6NXT2 135 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 POMZP3Q6PJE2 187 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 OFCC1Q8IZS5 231 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 ATG16L2Q8NAA4 619 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 FAM71CQ8NEG0 241 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 TMCO6Q96DC7 493 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 DHRS1Q96LJ7 313 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 PRSS27Q9BQR3 290 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 FUZQ9BT04 418 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 METTL7AQ9H8H3 244 aa16.5■□□□□ 0.23
ATG4B-217ENST00000475693 IGFBP1P08833 259 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SDHBP21912 280 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 CASP3P42574 277 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 GAS1P54826 345 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 EFR3AQ14156 821 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 DCST1Q5T197 706 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SPINK14Q6IE38 97 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 Q6ZPB1 254 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-217ENST00000475693 NUP54Q7Z3B4 507 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 ZNF227Q86WZ6 799 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 HIPK1Q86Z02 1210 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SVOPLQ8N434 492 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SNRNP27Q8WVK2 155 aaKnown RBP16.49■□□□□ 0.23
ATG4B-217ENST00000475693 FGF11Q92914 225 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SDCCAG3Q96C92 435 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 ITPKCQ96DU7 683 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 SLC35A3Q9Y2D2 325 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 URB1O60287 2271 aaKnown RBP16.49■□□□□ 0.23
ATG4B-217ENST00000475693 CHD8Q9HCK8 2581 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 A0A0G2JMM0 328 aa16.49■□□□□ 0.23
ATG4B-217ENST00000475693 A0A1W2PPB8 328 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms