RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 MYOTQ9UBF9 498 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 PCDHGA3Q9Y5H0 932 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 HS3ST3B1Q9Y662 390 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 A0A087WUJ7 227 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 ELOA3DA6NLF2 546 aaPredicted RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 C9orf172C9J069 976 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 GMFGO60234 142 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 FOXD2O60548 495 aaPredicted RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 NUDT14O95848 222 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 HTR1AP08908 422 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 PNMTP11086 282 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 NAGAP17050 411 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 BMP7P18075 431 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 FBXW4P57775 412 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 CRYZQ08257 329 aaKnown RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 PMS2P3Q13401 168 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 ELOA3BQ3SY89 546 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 RPL13AP3Q6NVV1 102 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 LINC00114Q6XXX2 140 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 SVOPQ8N4V2 548 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 ELOA3Q8NG57 546 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 OR8D4Q8NGM9 314 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 ELP5Q8TE02 316 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 CT55Q8WUE5 264 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 DGCR14Q96DF8 476 aaKnown RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 CCNL2Q96S94 520 aaPredicted RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 COPS4Q9BT78 406 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 POLDIP3Q9BY77 421 aaKnown RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 RTN4RQ9BZR6 473 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 AMBNQ9NP70 447 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 MEPEQ9NQ76 525 aaPredicted RBP18.12■□□□□ 0.49
SSR1-204ENST00000474597 PSORS1C1Q9UIG5 152 aa18.12■□□□□ 0.49
SSR1-204ENST00000474597 TMEM200CA6NKL6 621 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 CLCA1A8K7I4 914 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 FADS1O60427 444 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 RCBTB2O95199 551 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 NADKO95544 446 aaPredicted RBP18.11■□□□□ 0.49
SSR1-204ENST00000474597 RAB40ALP0C0E4 278 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 COX6A1P12074 109 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 TTKP33981 857 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 ZBED5Q49AG3 693 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 TIPARPQ7Z3E1 657 aaKnown RBP18.11■□□□□ 0.49
SSR1-204ENST00000474597 GLRX5Q86SX6 157 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 MISPQ8IVT2 679 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 SAMD8Q96LT4 415 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 RHNO1Q9BSD3 238 aa18.11■□□□□ 0.49
SSR1-204ENST00000474597 PCNX2A6NKB5 2137 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 NSG1A0A0A6YYJ2 146 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 ENO4A6NNW6 628 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 TLX2O43763 284 aaPredicted RBP18.1■□□□□ 0.49
SSR1-204ENST00000474597 JUNBP17275 347 aaPredicted RBP18.1■□□□□ 0.49
SSR1-204ENST00000474597 PGCP20142 388 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 RPS15P62841 145 aaKnown RBP18.1■□□□□ 0.49
SSR1-204ENST00000474597 CBFBQ13951 182 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 RAB39AQ14964 217 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 BORAQ6PGQ7 559 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 PRSS48Q7RTY5 328 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 NUP54Q7Z3B4 507 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 CYP4Z2PQ8N1L4 340 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 DEFB124Q8NES8 71 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 OR2T33Q8NG76 320 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 M1APQ8TC57 530 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 TUBA1CQ9BQE3 449 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 OR52D1Q9H346 318 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 TCFL5Q9UL49 500 aa18.1■□□□□ 0.49
SSR1-204ENST00000474597 FARSAQ9Y285 508 aaKnown RBP18.1■□□□□ 0.49
SSR1-204ENST00000474597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.09■□□□□ 0.49
SSR1-204ENST00000474597 PRKYO43930 277 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 HCN1O60741 890 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 ZNF354AO60765 605 aaPredicted RBP18.09■□□□□ 0.49
SSR1-204ENST00000474597 OR2J2O76002 312 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 MT-ND2P03891 347 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 FUT1P19526 365 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 P2RX1P51575 399 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 PLAG1Q6DJT9 500 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 SLC30A6Q6NXT4 461 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 NDUFAF7Q7L592 441 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 OAFQ86UD1 273 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 STX19Q8N4C7 294 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 ESX1Q8N693 406 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 OR13C2Q8NGS9 318 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 OR5W2Q8NH69 310 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 BRIX1Q8TDN6 353 aaKnown RBP18.09■□□□□ 0.49
SSR1-204ENST00000474597 TTC9Q92623 222 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 GGHQ92820 318 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 IMMP1LQ96LU5 166 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 IRF2BPLQ9H1B7 796 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 DNAJC27Q9NZQ0 273 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 FOXJ2Q9P0K8 574 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 EFCAB10A6NFE3 127 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 ENTPD6O75354 484 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 TGM1P22735 817 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 OTX2P32243 289 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 SLC1A3P43003 542 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 RPS18P62269 152 aaKnown RBP18.09■□□□□ 0.49
SSR1-204ENST00000474597 PGGHGQ32M88 737 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 TMEM201Q5SNT2 666 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 MEDAGQ5VYS4 303 aa18.09■□□□□ 0.49
SSR1-204ENST00000474597 XAF1Q6GPH4 301 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms