RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 RGS12O14924 1447 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ABCC5O15440 1437 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 EIF4G3O43432 1585 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SEMA4FO95754 770 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CD55P08174 381 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CT45A10P0DMU9 189 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 RPL13AP40429 203 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ELK3P41970 407 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 BDKRB1P46663 353 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CCT3P49368 545 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 EFNA3P52797 238 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ACTR3P61158 418 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 RPL8P62917 257 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 KLRC3Q07444 240 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 NUP160Q12769 1436 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 TMED1Q13445 227 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 MXD4Q14582 209 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SLC10A1Q14973 349 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SNCBQ16143 134 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 DPYSL2Q16555 572 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CEP85LQ5SZL2 805 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 GFI1BQ5VTD9 330 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 VITQ6UXI7 678 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CYS1Q717R9 158 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SSH2Q76I76 1423 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CTAGE6Q86UF2 777 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CDH26Q8IXH8 852 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CLEC4FQ8N1N0 589 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SUMF1Q8NBK3 374 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 OR8K1Q8NGG5 319 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 OR1F12Q8NHA8 337 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 M1APQ8TC57 530 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PIGCQ92535 297 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 MRPS31Q92665 395 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 RPL3LQ92901 407 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 C18orf12Q96KH6 178 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF396Q96N95 335 aaPredicted RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CCDC28BQ9BUN5 200 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 EDEM2Q9BV94 578 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ELOVL4Q9GZR5 314 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ADNPQ9H2P0 1102 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PPDPFQ9H3Y8 114 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 CLSTN2Q9H4D0 955 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PDS5BQ9NTI5 1447 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SMOXQ9NWM0 555 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 HYPKQ9NX55 129 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 DPM3Q9P2X0 92 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 ZNF221Q9UK13 617 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 SAMD4AQ9UPU9 718 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 RASD1Q9Y272 281 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PIGLQ9Y2B2 252 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 NAALAD2Q9Y3Q0 740 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 PRSS21Q9Y6M0 314 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 EIF2AK4Q9P2K8 1649 aaKnown RBP3.4□□□□□ -1.87
BRCA1-212ENST00000473961 MAGI2Q86UL8 1455 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 WDR7Q9Y4E6 1490 aa3.4□□□□□ -1.87
BRCA1-212ENST00000473961 KIAA0586Q9BVV6 1533 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 MSH6P52701 1360 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 KIF24Q5T7B8 1368 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ABCC11Q96J66 1382 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TCHHQ07283 1943 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 NOS1P29475 1434 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PPIP5K1Q6PFW1 1433 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 YTHDC2Q9H6S0 1430 aaKnown RBP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 A0A087WYN8 130 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 GOLGA6L4A6NEF3 574 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 EPM2AB3EWF7 344 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ANKRD65E5RJM6 399 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 E7ESA3 106 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 E9PAM4 449 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 G3V4G9 280 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 KBTBD11O94819 623 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 CAPN1P07384 714 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SLC2A3P11169 496 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 RNH1P13489 461 aaKnown RBP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 POU2F1P14859 743 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SYT1P21579 422 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 NMT1P30419 496 aaKnown RBP3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PEX19P40855 299 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ETV5P41161 510 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 ALDH3B2P48448 385 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 CDH4P55283 916 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 CASP8Q14790 479 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SLC5A12Q1EHB4 618 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 KCTD21Q4G0X4 260 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 NHLRC3Q5JS37 347 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 PAQR6Q6TCH4 344 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TRPM8Q7Z2W7 1104 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TPRA1Q86W33 373 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 SLC38A6Q8IZM9 456 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TMEM123Q8N131 208 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 CADM2Q8N3J6 435 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 OR5D13Q8NGL4 314 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 FAM81AQ8TBF8 368 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TCTEX1D2Q8WW35 142 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 RASL10AQ92737 203 aa3.39□□□□□ -1.87
BRCA1-212ENST00000473961 TOMM40LQ969M1 308 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms