RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PLAURQ03405 335 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 SGCGQ13326 291 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 OR1Q1Q15612 314 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 ARHGAP11BQ3KRB8 267 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 MRPL2Q5T653 305 aaKnown RBP19.54■□□□□ 0.72
COL18A1-207ENST00000473212 OR8H3Q8N146 312 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 OR5J2Q8NH18 312 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 YIPF5Q969M3 257 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 MS4A3Q96HJ5 214 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 PGLYRP3Q96LB9 341 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.54■□□□□ 0.724e-7■■■■□ 23.1
COL18A1-207ENST00000473212 MRPL39Q9NYK5 338 aaKnown RBP19.54■□□□□ 0.72
COL18A1-207ENST00000473212 KCMF1Q9P0J7 381 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 SLC17A4Q9Y2C5 497 aa19.54■□□□□ 0.72
COL18A1-207ENST00000473212 TBC1D3KA0A087X1G2 549 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 CDHR4A6H8M9 788 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 TBC1D3FA6NER0 549 aaPredicted RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SLC22A31A6NKX4 558 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SRP54P61011 504 aaKnown RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF85Q03923 595 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 RUNX3Q13761 415 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 TMEM240Q5SV17 173 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 TBC1D3GQ6DHY5 549 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 FBXO42Q6P3S6 717 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ZC3H14Q6PJT7 736 aaKnown RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 PXKQ7Z7A4 578 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ZAR1Q86SH2 424 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 GPALPP1Q8IXQ4 340 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 TMEM52Q8NDY8 209 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ZNF680Q8NEM1 530 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 OR4D9Q8NGE8 314 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 OR51A7Q8NH64 312 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 CD93Q9NPY3 652 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 CMC2Q9NRP2 79 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 LYARQ9NX58 379 aaKnown RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 PRUNE2Q8WUY3 3088 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 A0A1W2PRG6 482 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SC5DO75845 299 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SBK2P0C263 348 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SNRPBP14678 240 aaKnown RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 RAB3BP20337 219 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ESPNLQ6ZVH7 1005 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 CACNG6Q9BXT2 260 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SLC17A9Q9BYT1 436 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 ADGRL4Q9HBW9 690 aa19.53■□□□□ 0.72
COL18A1-207ENST00000473212 USP36Q9P275 1121 aaKnown RBP19.53■□□□□ 0.72
COL18A1-207ENST00000473212 SAGP10523 405 aaPredicted RBP19.52■□□□□ 0.72
COL18A1-207ENST00000473212 PYCR1P32322 319 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 NUDT1P36639 197 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 TSFMP43897 325 aaKnown RBP19.52■□□□□ 0.72
COL18A1-207ENST00000473212 PPP2CBP62714 309 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 PPP2CAP67775 309 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 DUSP8Q13202 625 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 SRSF5Q13243 272 aaKnown RBP19.52■□□□□ 0.72
COL18A1-207ENST00000473212 EXOSC7Q15024 291 aaKnown RBP19.52■□□□□ 0.72
COL18A1-207ENST00000473212 TRAM1Q15629 374 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 EIPR1Q53HC9 387 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 TOR2AQ5JU69 321 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 CD276Q5ZPR3 534 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 MTFR2Q6P444 385 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 SSX6Q7RTT6 188 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 PAQR7Q86WK9 346 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 BEST4Q8NFU0 473 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 OR6C4Q8NGE1 309 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 SMPDL3BQ92485 455 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 GHSRQ92847 366 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 OR2M2Q96R28 347 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 ERVMER34-1Q9H9K5 563 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 INPP5EQ9NRR6 644 aa19.52■□□□□ 0.72
COL18A1-207ENST00000473212 CD53P19397 219 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 RTL10Q7L3V2 364 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 LUZP2Q86TE4 346 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 ASPGQ86U10 573 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 OR5T3Q8NGG3 340 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 GRHL3Q8TE85 626 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 DACT3Q96B18 629 aaPredicted RBP19.52■□□□□ 0.71
COL18A1-207ENST00000473212 KXD1Q9BQD3 176 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 APOOQ9BUR5 198 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 SARGQ9BW04 601 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 TMEM5Q9Y2B1 443 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 DOCK8Q8NF50 2099 aa19.52■□□□□ 0.71
COL18A1-207ENST00000473212 TPD52L2O43399 206 aaKnown RBP19.51■□□□□ 0.71
COL18A1-207ENST00000473212 RCBTB2O95199 551 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 AGR2O95994 175 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 RAF1P04049 648 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 TNFRSF17Q02223 184 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 HACD4Q5VWC8 232 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 FAM109BQ6ICB4 259 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-207ENST00000473212 SFTPA2Q8IWL1 248 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 ARL14Q8N4G2 192 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 BPIFA2Q96DR5 249 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 PEX11GQ96HA9 241 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 RPP25Q9BUL9 199 aaKnown RBP19.51■□□□□ 0.71
COL18A1-207ENST00000473212 LRRC72A6NJI9 287 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 ADAM11O75078 769 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 LYPD3O95274 346 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 TPOP07202 933 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 ATF1P18846 271 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 CRMP1Q14194 572 aa19.51■□□□□ 0.71
COL18A1-207ENST00000473212 RNF113BQ8IZP6 322 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms